| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47112 |
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| Symbol | |
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| ID | 7202026 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011680 |
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| Strand | - |
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| Start bp | 478623 |
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| End bp | 480595 |
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| Gene Length | 1973 bp |
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| Protein Length | 540 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181386 |
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| Protein GI | 219122089 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0949637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTTGCTTCG ATGTGATTAG TGGAAGATAG CAAGATGGGC CATGCTGAGC CATTCTAGCT
CCTTTAGCAG TAGGCGACTT GCTTCTCAAA TCGAAAAGCG ACCCATGATG GAATCGGTGA
GGAGAAGAAG GTCGTCGCAG CTCAGTATGG AACGAAAACG CGACAAATTG GAAGATCCCA
ACAAGAAACA AACGTTTACA AAATATCGAT GGTCAAGATG TTTCTGGTCC AAAATCATTC
ATACTCTCCC AAGGAGGAAT TGCGCACGCA AGGGTGGCAC CATCATGCTG TTGCTGATTC
TGCTGCATGT GTTATCGCGG GATTATCTTT GGGGCGGCCC ATTTGACATC AGAGGCGGAC
TCTTCGGTGC TTGGGCTGAC GCTGGCTTGC GGCTCTTATT CTCATCGAAA GCAGCTACGC
CGATTGCAAA AGTAGACTAT CCACATGTTG TATTGCGATC CAGTCGCAAA GAGATCCCCG
GTTACAGTCT TTTTTTAGAA GAGCTGCTGT CGAGAGCAGC AGGAGAGAAT ATCGATTGGG
ACGCTTCAGA AGTACGCAAC CACGACAATC CACGCCATGC GCATTCGGTG GTGAACTTTT
TTGAAGGTGG AGATTACGAA TCATCTTCTA ATGCTTCCTC GGATTCTGTT ATTGACGTTT
TGGCGAAACA GAACTGTCAA CCACGTTGGC TTTGTCAGAG ATGCTTAAAC GCAGCCCAAT
ATGGGTCGCT GACTCAATGT CGTCAATTGT GCCCAGAGTG CCTTGAAGAT ACACTCTGCC
AGCCTTCTTT GGTTCGCAAT CCACCCTTTT CTATCCTCAT GCAACGTCCA GTGACATCAA
CGATTCCACG TATAGTTCAT ATGATGTGGC ACGAGCCACT GGACAGTTTG AAGTATCCGG
AGCTCGTCCG GATTCAAAAC GGATGGCGGA GTACCGACTT TTCCTTTCGA TTTTACACGC
CAGATACCGC ACGTCGGTAT ATTCAAAAGA GCTACCCGTT GCGTATCATA GAGGTGTATG
ATTCTATCCA GTCGTTGTCA ATGCAGATTA ATTGCGCGCG AGTTCTGATT CTTTTGAGGG
AAGGGGGCGT GTTTGCAAAT GGTAAGCCTT GGTGGTGGCT ACTTTTGAAT GCCCCTGTGC
TTGTTCTCAA AAATCGAAAT TAATTTTTCC AAGTGGATTT ACTCTTGGAA GTCAATCTAG
AGGTTCTCTT GGTTTCAGGC GTGTCCTTTT TTGCTGCGCG AGAAGACGAT ATGGAACACT
GCCTTTGGAC TGGATTGGTT GGAGCAAGTC CTGGTCATGT GATTTTGGTT AAGGAAGCGG
AAGAATTTTT AACACGCCTG TCTACAAAAG GAAGCTATTT TGACATCGAC CGTAGCTTAT
GTACGGCGCT GGGACCGAGT GCCGAGCTGT GGAAAGCACG TGTGTATGTC GATGAAACAA
CTATCGATTC CTGCGCGCTT GGCCGAGCCG TTCACACTGC TCTTGGAGAG CGGAATTCAG
TGATGCATTT TTCATTGGGA AAACTTCAGA TTCCTTTAAG CAATAACAGA CTCTATGAAG
GAGATGCCCT TATACTTCTC GTAAGTCTAG ACAAGATCAT CGGCAAACAC AGATACTTTG
ATTTTTTTAA CGGATCTTGT CCCTCTTTTC TTACAGATGA GTAAATCTGA CACTGGTGCC
ACTCGAATTT CTGACATCGA GCGAAATATA TTGATTGCCT CCACATCTAT GGTGGGACTC
TCGAAAGAGA GCCTGTACGA GCGTATACAT CACGCCACAT TGCGGAACTC GAGAGCGGAA
ACCAGCACTG TGAACCTAGG TATGGGAGTA ACCAAACAAA TTAGATTTAT TGATAAACGT
TAACTTTCCG GATGCAAAGA GTGATCCTGA ACTGATTTGT ACACGTGTTG TCTATTTATC
CGCGTGCCCT TTCTACTTTG TAGCCCATGA AGGGGACTGT CCTGGAACCT TAG
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| Protein sequence | MLSHSSSFSS RRLASQIEKR PMMESVRRRR SSQLSMERKR DKLEDPNKKQ TFTKYRWSRC
FWSKIIHTLP RRNCARKGGT IMLLLILLHV LSRDYLWGGP FDIRGGLFGA WADAGLRLLF
SSKAATPIAK VDYPHVVLRS SRKEIPGYSL FLEELLSRAA GENIDWDASE VRNHDNPRHA
HSVVNFFEGG DYESSSNASS DSVIDVLAKQ NCQPRWLCQR CLNAAQYGSL TQCRQLCPEC
LEDTLCQPSL VRNPPFSILM QRPVTSTIPR IVHMMWHEPL DSLKYPELVR IQNGWRSTDF
SFRFYTPDTA RRYIQKSYPL RIIEVYDSIQ SLSMQINCAR VLILLREGGV FANEVLLVSG
VSFFAAREDD MEHCLWTGLV GASPGHVILV KEAEEFLTRL STKGSYFDID RSLCTALGPS
AELWKARVYV DETTIDSCAL GRAVHTALGE RNSVMHFSLG KLQIPLSNNR LYEGDALILL
MSKSDTGATR ISDIERNILI ASTSMVGLSK ESLYERIHHA TLRNSRAETS TPMKGTVLEP
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