| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47105 |
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| Symbol | |
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| ID | 7202018 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011680 |
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| Strand | + |
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| Start bp | 423920 |
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| End bp | 427165 |
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| Gene Length | 3246 bp |
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| Protein Length | 1038 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181206 |
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| Protein GI | 219121714 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00493639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA CCAGAAGCAA TACTTTTAGT GATGCTACTG TGGAGTATGT TGTTGGAACT
GTCCTGGATG CTAACTCTGA GTCTCCTTAC AGGCTTGTCC TGAAGGAAGC TGGTATTGAA
TCTATGATGG ACATTCTTGA GTTGACTTTG GATGACCTAC TGTTTCTGCA GTGGACTTCA
GGAGAGGAGA CCCCCAAGAA GTTGACCCTT GTCCAATCCA AGCGTATCAT GCACCTCATT
GCCTGGCATA GAACTCAGGA TGACCCAAGC AATGTGGATT GGTTTTCATT GACTCCTACA
GTACTCAGAC AGTTTAGAGA AGGTGAAATC TATTCCAAGC CCCAATGTGC AGATGAGATG
TCTGAAAATT CCTACACTGT TCCCCATGCC CAGCCAGCAT TGCCTAATGC TGCTTATGAC
TTTGACAAAG GTACTGAGAG AAGTATTGCT GACTATCCTG TTCTGAAAGA AGCCAAACAA
TGGTCCTCTT GGAATCGCCA GACCAGAGCT CTTGCCCTTT CCCATGGCCT ACTGAATGTA
TTTGACCCTG CCTATGTTCC CCTCAACCCT GATGAAGCCT CTCTGTTTGC TACTCAGCAA
AGATTTGTCT TCAGTGTGTT TACCATGGCC ATCAAGGAAA CCAAGGGAAT GATTATCATA
CGCCAGCACT CTGATGAAAA GAATGCTATA TCTCTGTTTG GCAATGCTCA GCTTGTCTAC
ACTGCCTTGA TGGCTGCCTA TGAGGGTGGT GTTGTGGCTA CACTTTCTGC TCAGTATCAT
GAAACCCTTC TCTTGAATTA CAACTTGAAC AATTCCTGGA CCAAACCTCT TGTGACCTGG
TTTTCTTCTT TTGAGCACAA ACTGCTGGAT TTGGACAATG TGCTTCCTAC TCCCAAGGAT
GATGCTTGGA AGCGCAACAG ACTTGAAATG GCTGTGCTTC ATCATACTCA GCTTCAGACC
TTTCATTCTA CACTTTCTAC CCAGGCACTT GTGATGGGCA AGCAACATGA CTTCCTCTTT
GAACTTGAAG CCTGCAAGAC TCAAGCTGCC AAATTGGATG CGCAGGCTGG CATGAAAGTT
AAGACACAGA GGCAGACCAA CAACCATGAG CGTGGTGGGA CCAAAGGTAC TGGCCATGGC
AATGCTTCCA ACAGGAAGGG CAATGCTGGC CGTGGTGCAT CCAAGGGTAA AGCCAAGGGA
GGCAAGTATT CTAACTATAT TGACCCTGCA AAATGGAATG CTATGACCTC AGAAGAAAAG
CAAGCTGTCT ACGATGCATG CTCTACACCC AGTGCAAGCA ACACTCCCAA TGCAAACCCA
GTCCCTTCCT CTGTGCTCAT CAACCAAGGT ACTGTGCAAC CAAGTTCTAC TTCTGATGCT
GTTCCAACTG GACAACACAT TGTCCCCAGT AGTGGTGCCT CTGCTCTCTC TGGTACCACC
AACCAGTCTT TCATCAGGCA ACTGCTTTCT AATGCTACTG CCAGAACTCC CACTGTACCT
ACTTCTTCCC ATGATGGGGA GATTGTCATT GATGGGCTCA GGTTCAGACA TGTTAATATG
CACAAGGTCA GCTACTGTGT TAGCAACTAT GACTTGGCCC TTCAGACCCA CCAGGGTTCA
CTCATTGATG GTGGGGCTAA TGGTGGCATG TCTGGTGCTG ATGTCAGAGT CTTGGAAAAG
GGATTTGCCA CTGCTGATGT TACTGGTATT GGCAATCATG CTGTTTCCAA CTTACCTATT
TGTCAGGTTG CAGGTGCTAT CATGACTACA AATGGATTGA TCATTGGCAT CTTCAGTCAG
TATGCACATT TTGGAAAAGG AAAAACTATT CATTCTAAGC CTCAGATGGA ACAGTTTGGA
CTTACCATTG ATGACAGATC CAGACTTAGT GGAGGGCAAC AAAGAATGGT AACCCCTTGT
GGACACATCA TCCCTTTGCA CATTTGCAAT GGTCTTTGCT ACATGGATAT GCACCCTCCC
AGTGATACTG AAATGGATGC CCACCCCCAT GTCTTCTTTA CTGCTGACAT GCCTTGGGAT
CCCTCCATTT TGGACAATGA ATACACAGAG CATGAGTTCT CTGACTGTCT TGCACCTGAA
GACTTCACTC CTTTGGATCA TCGTGTGAAC CAATTTGGAA CTACCACTGA TTCTGATTTC
TACCTTGACA CTTGTATTCA TGCTGTCCAT AACATGCAAC TTGTGCATTC CCAACATGTC
TCAACTCAAG TGCCTGACTT GCAAGCACTA CGCCCTAATT TTGGATGGAT TCCTGTTGAG
AGATTGAAGA ACACCTTGGC TAATACAACT CAGTATTACA GGGCTTCCAT CTCTTACCCA
TTCAGAAAGC ATTACAAGTC AGTTTCCCTG CTGCTAATGT TCACAGATTG AATGAATGGT
TTGCTACTGA CACCTTCTTT AGCAATGTAC CTGCTCATGA TGATGGTTAC ATGCACCATG
GTGGTGCTAC TATGTTGCAA GTCTATGCTG GCAAGGACTC TGGATACTTA GCTGGGTATC
CCATGAAGAT GGAAGGTCAA ATGCCCCAGA CTCTAGAAGA CTTTATCCGT GATAAAGGTG
CTCCTTTGGG CTTGTTCAGT GACAATGCTA AGGCCCAGAC CTCCAAGGCT GTTGAGACCA
TTCAGCGCCT CTACCATATT GCAGATGCTC AATCTGAGCC TCACTATCAA CATCAAAACT
TTGCTGAGCG CTGTATCCAA AACATCAAAT GTATGATCAA TACTATTATG GATCGCACTG
GTACCCCTGC CAAGTACTGG CTCCTTTGCA CTCTGTTTGT CATTGACCTA TCCAATCACC
TTGTGAGTGA TACACTTCAA GCAACTCCTT TGACCCGATG CTTTGGTATT CCCACTGATG
TTTCTGCTTA CCTCACTTAC CATTGGTGGC AATTGGTTTA TTTTGAGAAC CATGATGGCT
CTTTTCCCTC TACTCCTAAG GAAGGCCTTG CTCATTGGGT TGGTCCTACT AATATGAAGG
GGGATGTATT GACTTATCAG TTGCTGACTG TGGATACTCA GCAGCTGCTC TTTCGCTCCA
ACATTTGTCC TGCTACCACT GACCCCATGG TCCCTAATGC CAGAGTTGAT GCCTCTGCTG
CTCCACATCT TCACCTGGAG GCAGGGGAGG AAAAGGACCA GTCAGACAAC ATCAAGTCTA
TCTCTGCTTT CCAAAAGATT GATCCTTCTT ATGTAAAACT GCCTCTCTTC TCTCCAGATG
AGTTAG
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| Protein sequence | MTTTRSNTFS DATVEYVVGT VLDANSESPY RLVLKEAGIE SMMDILELTL DDLLFLQWTS
GEETPKKLTL VQSKRIMHLI AWHRTQDDPS NVDWFSLTPT VLRQFREGEI YSKPQCADEM
SENSYTVPHA QPALPNAAYD FDKGTERSIA DYPVLKEAKQ WSSWNRQTRA LALSHGLLNV
FDPAYVPLNP DEASLFATQQ RFVFSVFTMA IKETKGMIII RQHSDEKNAI SLFGNAQLVY
TALMAAYEGG VVATLSAQYH ETLLLNYNLN NSWTKPLVTW FSSFEHKLLD LDNVLPTPKD
DAWKRNRLEM AVLHHTQLQT FHSTLSTQAL VMGKQHDFLF ELEACKTQAA KLDAQAGMKV
KTQRQTNNHE RGGTKGTGHG NASNRKGNAG RGASKGKAKG GKYSNYIDPA KWNAMTSEEK
QAVYDACSTP SASNTPNANP VPSSVLINQG TVQPSSTSDA VPTGQHIVPS SGASALSGTT
NQSFIRQLLS NATARTPTVP TSSHDGEIVI DGLRFRHVNM HKTHQGSLID GGANGGMSGA
DVRVLEKGFA TADVTGIGNH AVSNLPICQV AGAIMTTNGL IIGIFSQYAH FGKGKTIHSK
PQMEQFGLTI DDRSRLSGGQ QRMVTPCGHI IPLHICNGLC YMDMHPPSDT EMDAHPHVFF
TADMPWDPSI LDNEYTEHEF SDCLAPEDFT PLDHRVNQFG TTTDSDFYLD TCIHAVHNMQ
LVHSQHVSTQ VPDLQALRPN FGWIPVERLK NTLANTTQYY RASISYPFRK HYNNVPAHDD
GYMHHGGATM LQVYAGKDSG YLAGYPMKME GQMPQTLEDF IRDKGAPLGL FSDNAKAQTS
KAVETIQRLY HIADAQSEPH YQHQNFAERC IQNIKCMINT IMDRTGTPAK YWLLCTLFVI
DLSNHLVSDT LQATPLTRCF GIPTDVSAYL TYHWWQLVYF ENHDGSFPST PKEGLAHWVG
PTNMKGDVLT YQLLTVDTQQ LLFRSNICPA TTDPMVPNAR VDASAAPHLH LEAGEEKDQS
DNIKSISAFQ KIDPSYMS
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