| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47058 |
|---|
| Symbol | |
|---|
| ID | 7202132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011680 |
|---|
| Strand | - |
|---|
| Start bp | 299208 |
|---|
| End bp | 301144 |
|---|
| Gene Length | 1937 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181347 |
|---|
| Protein GI | 219122008 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGGTAAAATA CGAAATCTGC ATTGATAGGG CCCGGCCTTT ATTTAGGAAT TGAGTTCCTA
TCTTTACGAT CCGTCATGGC GATCAAGAGC TCTTCTAGTA ACGTGACAAG CAAGCGCAAG
GATGGGGACA GCAAGTTTTC CTCGCAACCC TCGAAGAAAA GTAAAGGAAG TGGTGCCAAA
CACTCTACAG TGCCGCCTTC TACAGTGGGT TCGAAACGTG CTGTTAAGCA GGAGCGACAG
TCCCAGCGCA AGCACGCCGA CGTTGTGAAC GACGCCAAGC GGATTTGGAA TCAACTGCGT
CTCAAAACAA ACACGTCCGG ACAGAACCGT CAATATATGG ACACGCTCAT GCCCTTGATT
ACGGGCAAGG CCAATGAAAT CGCGTTACAG CACGACGCGG CGCGTGTCGT TCAAGCCGCG
ATTCAGTTCG GAACGGTTGA AGAACGGCGT CTAATATTAC AAGAACTGTG CGCGAAGCAA
AACAACTTTG CGGAACTCTG TAAATCTCAA TACGCACACT TTTGCGCTTT GAAAGCGATC
AAGTATTGTC ACAGCGACCC AGCCTCCGTG AAATTGATCA ACAAAGCACT CAAAGGACAT
ATGCCTAGAT TGGCTGTGCA CGCCGTCGGA TCTCGGGTTG TACAGTCAAT TTTCAGCACA
ATGACTCCAA AACAAAGTGC GGTGCTCAAG CAAGAGTTTT ATGGGCCACA TTTTGCTTTG
TTTGCGCTGG ACCTGCCACG AAATGATGCT GTGCCGACGT TGGCGACGAA CATAGCTGAG
GCGCCGGAAA AGAAAGAAGC AACACTCATA TTTGTACGCA ACTTGATCAA TAAAGGCATG
GAAAAGACTC TCTACGGTTT CACTTACTTT CAGGATCTGT TTGCCGAGTA TTGCGAGGTG
GCCGACCCGC GAGAGATTCG CATTTTGGCG GGCACGGCGG CCGACAACTC AATTCATCTC
TTATCTGGTC GCGCTGGGAC TCGCGTGGTT GCTTCCTTGA TTTCCTATGG CACTGCTAAA
GATCGGAAGC GCATCATGAA AAGCTTGAAA GGCTACACCA AGTCAGGACT ACTGCATCAC
GATGCATACC TAGCAATCAT CCGTTTGGTT CAGTTGACGG ATGATACAGT GTCTATTCAC
AAAAACATTT TCAACGAACT GCTCTTACCG AGCGATAAAT CCGACGAAGA ACTATCTTGT
CCACTTTTGG AGCTGGCGCT TTCCGATACC GGCTCCAAAC TTCTTTTAAT GCTTCTTGTT
GCGGATCCGG AAACATTGAA GAAGTTTTTT GATCCCTACG AGCTTTCGGT ACTTTTCGAA
AATCCGACTG TGATAGACGA TGGTCAAGAA GTTCTGACAA GCAAGAAGGA GCCAGAAATA
CGACGAAAAG AACTCATCAA GTATCTTCGA GAGCCGTTAA TTGAGATGTG CGCCAAAAGT
GCGAATGAGT TGATCAGGTC TCGGCCGGGA GCTCTTGTAC TTCGAGAAGT GTACCACTCG
TATCGACCGA TCTCGGTAGT TGAAGCGATT GTTGGAACGT GCCAAGCAGC ATTGAATCAG
GATTCCTCGA AAGGCGACGA AAAGGATGTC CAGAATTATC GCCTCTTTGA AGATAGAGAT
GGACATTTGG CAGTGAAGAA TCTTTTATTG GCTGATTCCG CGAAAGAATC AGAGGCCAAG
CTGGCGTCAG CTTTTTTCGA AACCTTCCAA GATCGACTGA TGGAGATTGC CCAATCCAAT
CGCGGGGCTT TCGTTATTAC AGCTCTTTGT AAAGTTTTGG CTGTAAGAAA AGGCGCTATT
TCCAAGTTGA ATCAAGCACA ACTGAAAAAA TTGGCCGACG GCAAAGGTGC TACTGCGGGG
TTTAAAGCAC TAGTGAATGA GATGGATGGC AAATAGCTTT TCTGCGTAAT TTCTGCATCG
TAACGATTAC ATATCAT
|
|---|
| Protein sequence | MAIKSSSSNV TSKRKDGDSK FSSQPSKKSK GSGAKHSTVP PSTVGSKRAV KQERQSQRKH
ADVVNDAKRI WNQLRLKTNT SGQNRQYMDT LMPLITGKAN EIALQHDAAR VVQAAIQFGT
VEERRLILQE LCAKQNNFAE LCKSQYAHFC ALKAIKYCHS DPASVKLINK ALKGHMPRLA
VHAVGSRVVQ SIFSTMTPKQ SAVLKQEFYG PHFALFALDL PRNDAVPTLA TNIAEAPEKK
EATLIFVRNL INKGMEKTLY GFTYFQDLFA EYCEVADPRE IRILAGTAAD NSIHLLSGRA
GTRVVASLIS YGTAKDRKRI MKSLKGYTKS GLLHHDAYLA IIRLVQLTDD TVSIHKNIFN
ELLLPSDKSD EELSCPLLEL ALSDTGSKLL LMLLVADPET LKKFFDPYEL SVLFENPTVI
DDGQEVLTSK KEPEIRRKEL IKYLREPLIE MCAKSANELI RSRPGALVLR EVYHSYRPIS
VVEAIVGTCQ AALNQDSSKG DEKDVQNYRL FEDRDGHLAV KNLLLADSAK ESEAKLASAF
FETFQDRLME IAQSNRGAFV ITALCKVLAV RKGAISKLNQ AQLKKLADGK GATAGFKALV
NEMDGK
|
|---|
| |