Gene PHATRDRAFT_47001 details

Gene Information

• Locus tag: PHATRDRAFT_47001
• ID: 7202235
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 144562
• End bp: 146662
• Gene Length: 2101 bp
• Protein Length: 534 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002181146
• Protein GI: 219121589

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGTACGTACA AGCTAGTCGA GCACCCCATC TCCTTACACA CCCCCATTCT CTGAGTCGTG 
CACCCGCGTC TACAAACAAT TCGTTTGTAT CGAGTACCAG TGTTCTAAGC ACCCGTACAT 
AGTTTCGAGA CTACAAGGAG ATTGTAGCAG GTTGTTCGAA AGCAATAAAG CAAGGACATC 
CTTTTTCTTC AATCCAGGCG CCCTCTGAGT TGGTGACTAC GAGCGATCAG TCCGGGCGCT 
TTCAGGAGTA GGACAATGAG CCATTCGGTG GCTGGCTCCT CCGTGGATGT TTCGTCCTCG 
AATTCGGTGG CTTCTTCAGG TGACGCTTCT CCGACGTCCG GCTCTCGTAT TTTGAATCAA 
AGCACTCCTT CCAGCGATGC TTCTACGGTG GCTTCAGTTC CCTCTGTAGA ACCTCAAAAT 
CCCTTTGAAA TGTCGCTAAA CGACACGGCA GTGTCTGCTT CCGGAGCCGC CGAAAAGACT 
AATCAAAATA CGTCTTCTCC GGCTCGAAAC GGTTCAAATC CTCCTTCTCC GATGCATGCT 
CATGCCTCTC ACCAGACCAC TCGCTCGCAT CCTTCTCCGG TTGGAACTCC GGTTTCGACG 
ACCCCGCTAC GCGAACCACA TTCGCCGGGC TATCATCAAG CGCAATCGTC TCCCCCTCAC 
GCCATCACAG GAGTCGGCAG TTTGACGGTA CCCACGTTGT CGCAATCGGA TCAAGCGCGG 
TCTCGTATTC AACAGCAGTT GCCGGGTCAT TTGCAGACTT TTCCTAGCCC TGCTCAGCAC 
GGCGTGCGCG AGCCCGTATT TGATGATGAT GAGAATACAG AACCGTCGTC CACCAACAAT 
ACTGCTGATC AGCAGCATCA GGAGGTTGGG CACGGCTCTT CTTTCATTCG CTTTCTGGAA 
AATACTCGTA AGCGCTTGAG TGTTGCCAAC AAGGATGAAG ATGCAGAAGA TCCTTTGGAA 
GACGAGGAAG GCTTGGACGG TGCTTTGATC TATGGTTATT TGCAAAAAAT GGGACGCAAC 
GGCAAGTGGC AAACACGCTG GTTTGAATCG GATGGCGAGT GTTTGTCGTA CTTCAAAAGC 
AAGAAACGTA CAAAATTACT GGCCACGTTG GATCTAGAAA AGGTAAGTTT GTGTGCTCAT 
TTATGTTAAC GGTGAGTGAT TATGGAACTC CGGACCCTCA CAAACCATGG CATGACATTG 
ATTTATGTAG GTTGGATCGA TTTGTATTGA TCCACAAGAT CCACAAGGTT GCTCGTTTAC 
CATTCAAGTG TTGGGTCGAA TGTATCATTT GCGTGCGAAC AGCAAAGCCG CGACGAAGGA 
CTGGGTAATT ACACTGAACA GGATCAAAGA AGCCAAGATG CAGCAAGGGC ATATTCATCT 
TGTCAACCCT TACGAACAAC AGCCGCAGGA TCTCTTGGAT AACCACGAAG AGATAGTCGC 
GCCTCGGGTT GTCGTGGTGG CCAATCGGGA ACGGACACGC GCCGTTGCCG AGACCATCGA 
TTTTGACCAG CTTATCCGTG TTGACCAGAA TGGTGAGAAT CGTGAGTTGA CCTATGACAA 
TTCTAAACGG CGTTCGACCA TTGGAACTGT GGTTTTGGGG CGCTGGACAA AGCGTCGTTC 
GTCGCTTTCT CGCCTCAGTG CCAAGTTCTC CAAGTGGGCC CGTAGTCTGA AGAAGTACAG 
CTGTACCGAA TCAGGTACAG AAAATGTGCA GCTCGATCGC TACGTTCATC CTCCTGGTCA 
TGATGACATA CCGAAGCGTC GACAGCCAGA TTCTGGTCCA AAGCTCGCTG CGGACGCAGA 
GTCGAACCCT GTAAGCGTTT CAGGGTGGAT TGGCAAGGAG ACGTCCCGGT CAGGACAGGC 
TGGAAGCGGA TCGGCAGATG TACCCCAACC AACACGTGCC GTCCGTAGCA TGAGCCAAGC 
ATCCGACGAT GTTCGCATGC TATCGTAGAA GGCCGATGCG TCCATGATAG AGAGGATTGC 
AGTGCTGAAG CAGGTCGCAC ATTCTGCGAA AATGCTCTTA TATGTTTTTT ATATTTCGTG 
CGAGAAGAAA ATTGATAGTG GTAGGGTTGA ACGTATTCAG TTTCTTGGAA TGGCATATTT 
T 

 

Protein sequence

MSHSVAGSSV DVSSSNSVAS SGDASPTSGS RILNQSTPSS DASTVASVPS VEPQNPFEMS 
LNDTAVSASG AAEKTNQNTS SPARNGSNPP SPMHAHASHQ TTRSHPSPVG TPVSTTPLRE 
PHSPGYHQAQ SSPPHAITGV GSLTVPTLSQ SDQARSRIQQ QLPGHLQTFP SPAQHGVREP 
VFDDDENTEP SSTNNTADQQ HQEVGHGSSF IRFLENTRKR LSVANKDEDA EDPLEDEEGL 
DGALIYGYLQ KMGRNGKWQT RWFESDGECL SYFKSKKRTK LLATLDLEKV GSICIDPQDP 
QGCSFTIQVL GRMYHLRANS KAATKDWVIT LNRIKEAKMQ QGHIHLVNPY EQQPQDLLDN 
HEEIVAPRVV VVANRERTRA VAETIDFDQL IRVDQNGENR ELTYDNSKRR STIGTVVLGR 
WTKRRSSLSR LSAKFSKWAR SLKKYSCTES GTENVQLDRY VHPPGHDDIP KRRQPDSGPK 
LAADAESNPV SVSGWIGKET SRSGQAGSGS ADVPQPTRAV RSMSQASDDV RMLS