| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47000 |
|---|
| Symbol | |
|---|
| ID | 7202101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011680 |
|---|
| Strand | - |
|---|
| Start bp | 142780 |
|---|
| End bp | 143836 |
|---|
| Gene Length | 1057 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181309 |
|---|
| Protein GI | 219121929 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTTTATTGAT TAGCATATTC AAACTATCCC CTTTCTCTGT ATAAACTCAC AGACCAACAG
CGTACTTTCG TCGCAGAGGA GAAACATGGC GCACTTGTTA ACGAACCCTC CCAACGTGAA
CAAGGATACA TTCGCTCTCG AGCCCTCGGA TCATTCGTTG GGAAGCTCGG TCAGCGATCG
CTCCTACAAC GAGTGGAGGT ACGGGGAAGA GGCGAGCTTG TATTCCATTG CGGAAGATTC
ACGGGAAGAC GGCCCGTCAG AATTGGTGTC GGATGCAACA CGATCACGGA CAAAGCGAAC
CACTATCGCC CAGCCTTCAT CGGCAGCAGA AATTCATGTG ATAGACGAGG CGTCGCCCGT
TACACCCGAC GACAAGGGCG AAAATATGTT CAAGATGCCT AAGATTCACT CGGATAGGCT
GCCGAATAGT AAAGAGGGAA AAGATAATGA CGAATATGGT CGCTGTCCGA ATTTGCGTCG
TTTCAGGGTT TCCATTGCTG CTTTGTGCAT TGTCCTATTT GCGGTGGTTC TTGCGATTTC
GCTGACTGTC CCGAATGACG ACGCATCACC AAGTCAAGTT AAAAGCAATC TGCAAGACGC
TGACGCTCAG GGGCCTCCTA CAGCCTCACC TGTGACCGTA CCCGTCGCGT CGCCAACTAC
GGTGCCTCCA TCCAGGGATT GGGAAAGCGT CATTACCTCT GAAGCTCGCA CCAGAGTTCT
AGCTGCAGTG TCAGCATGCA CCGATGAATC GCTCCTGTTA GATCCTTCGA CGGTACAAGG
TGCGGCGCTC GCTCAACTAA CCGACGAAGT ATCGGGGGAT GCGAATGTGG ACGACAACAG
CACTGGCATT GATTTCTCAC CAAATCACAG CGAAGAAAAA TTGTTGGAAA AATTCGTTTT
GTTTGTGTTC TTTATGTTGA CCGACGGTGA GAGTTGGTTT ATGCAAGAAG GCTGGGGGAC
CGAAAGCGAT GTCTGCATGT GGACAGGTAT TCTGTGCGGG GACAGTCAAG AAGGGGCTTG
CGAGATTTCC GGAATATCGA TGAGTAAGTA CGAGTGA
|
|---|
| Protein sequence | MAHLLTNPPN VNKDTFALEP SDHSLGSSVS DRSYNEWRYG EEASLYSIAE DSREDGPSEL
VSDATRSRTK RTTIAQPSSA AEIHVIDEAS PVTPDDKGEN MFKMPKIHSD RLPNSKEGKD
NDEYGRCPNL RRFRVSIAAL CIVLFAVVLA ISLTVPNDDA SPSQVKSNLQ DADAQGPPTA
SPVTVPVASP TTVPPSRDWE SVITSEARTR VLAAVSACTD ESLLLDPSTV QGAALAQLTD
EVSGDANVDD NSTGIDFSPN HSEEKLLEKF VLFVFFMLTD GESWFMQEGW GTESDVCMWT
GILCGDSQEG ACEISGISMS KYE
|
|---|
| |