| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_46983 |
|---|
| Symbol | |
|---|
| ID | 7202090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011680 |
|---|
| Strand | - |
|---|
| Start bp | 99804 |
|---|
| End bp | 101756 |
|---|
| Gene Length | 1953 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181299 |
|---|
| Protein GI | 219121908 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.817353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CACGAAGAAT CTGAATTCCA CCACGATCTT CTGGCATAGT CGTATTCTCT GTATTCGTGT
CACTCCAGAA GTACTTTGTT GAAGGGACAG TCAAGGATGA AACTTTCGGG TGGCCTTGCT
CAGGGACTCA GCCTTGCGGT GTTGGGCGTG GGCCTTGCTC GCGCCGAGAT CCGGGACATG
GAGTTTCTGC TGGAACCGAC CGAAGACTCT ATCCACTTTA CCGACGGATA CTTGCGGGGT
CCCGGCTATA TAGATCTATC CGCGCTGGTC TTTACGGCGG TTTCCGAAAA TTTCACCCCC
GTCGACGTCG GCACCAACGA CGATTCGCCT CTCAATGACG ACGACAACGA CGACAATTCG
AACGCACCCG ACGATACTGG TGCAGACGGT GGAAACCGAC GAGACTTGAG CGCACGTGGA
TTGGACGGAG GTGTCGAGGA AGGTCTAACG ACGGTAGATA TGGCCGTCAT TGGGCTACCC
CAAAAATGTG CGAATAGTCG ATCGGGCTGC GATTGGACCG AGCAAGGAAT AGGAGGGCGT
CTACCGGATG GAAACTTGCG ATGGTGCTGC TCTACCGAAG CTGTTGCCGC TGGGCTTTGT
GAAAGTCACA ATAGCGGCAA ACTCATTATC AACTCGACTT CGTTTACTGG GGCATACAAA
TTTGTAAACG TCCCCCCTCA CGGACCGATG AGTAAACATC TTCGGTTTGG TCAGATTAAC
GAGGCAAATT CCGGTCAGTT TGTAGTGGTT TTCGCCAACT GCAACGAAGG CGGACGACAG
ATTGTTGCGC GTGGCAAAAC TGTGTGGAAG TCTGTGCACG GCTATCTACC GGGAGAACTC
TACGGATTTA TGAATTTCTA CGCCATCTTG ACGGGTATGT ACCTTATTCT GTTACTTTGG
TACGGCTATC TCATGCACGT GAACGAAGAA TCAAGAATTG CCATTGAGAA ATGGATCCTC
ATGACAACTG TACTCGGTTT ACTGGAAATG TTCTTCCGCA CTGGCGACTA CTTTGTCTGG
AACGTTGACG GATATCGGAT GAACTTGGCC ATGTACATTG GTATAATTCT GGGAGTCGTC
AAACGCGGAC TCAGTCGAGC ACTGATCATC ATGGTAGCGC TTGGCTGGGG AGTTGTGCGT
GATTCGTTAG GCTCGGCTTT GAGGACAATC ATTGTTCTAA CCGCTGCGTA TGTTGGTGTT
TCTGTCTCTC GCGATCTCAT GCTGGTCTTC GCCATTGAAG ACATGGAAAC GCTATCCTAT
GATGCGGAAG TTGAGCTCTT TGATGTTGTG ACGATATTGA CATTTGTTGT TGCGGCTGTC
GATGTCATTT TCATTCTCTG GATTCTTGAT GCCCTCAATA ACACCATGGA ATACTTACAA
AGTATGAATC AAAGTCGCAA ATTGATGCGG TACTTGCGTT TGCGGTGCAT TTTTTTGTTT
TCAATACTGT TTGCTACCAT CTGGGTTGTT TTCTCCTTGG TTGATACGTA CGATGAAAAC
GGAATCATTC GGGAAGAGCA TGAGTGGTCA GTAGATGCCG CAACTGAGAT CAATTACTTT
TACGTGCTGG CGGGGGTAGC TTTTTTGTGG CGGCCCAACC CCAGTGCGAA GGAGTACGCC
TACGTCATGG AGCTCTCAGC TACGGGCGAA GGGAATGACG GAGAAGATAC ACACGAACTA
GAATTAACAG GGGTTGTCCC ATCAGCGTTA GACGATGACG ATGATGAGGA ACCGTCAGGG
AAAAGCAACG GTTACCATGA TAATGATCAC GATGACCGGT TTCGAATCGA CGACTCGGAA
GCGGCATAGC ACACAAGCAA GTCATTCGTA TTTGTAACCT TTTCCCCCCA AGGGTCAATT
CATCTGCAGG CATATATACC GAAGCAGTTT CCTACAGCCT GTTCACGCCC TAGACATTAA
CGTAATACAG CTCCTTCTTT TCCACTCGGG TTA
|
|---|
| Protein sequence | MKLSGGLAQG LSLAVLGVGL ARAEIRDMEF LLEPTEDSIH FTDGYLRGPG YIDLSALVFT
AVSENFTPVD VGTNDDSPLN DDDNDDNSNA PDDTGADGGN RRDLSARGLD GGVEEGLTTV
DMAVIGLPQK CANSRSGCDW TEQGIGGRLP DGNLRWCCST EAVAAGLCES HNSGKLIINS
TSFTGAYKFV NVPPHGPMSK HLRFGQINEA NSGQFVVVFA NCNEGGRQIV ARGKTVWKSV
HGYLPGELYG FMNFYAILTG MYLILLLWYG YLMHVNEESR IAIEKWILMT TVLGLLEMFF
RTGDYFVWNV DGYRMNLAMY IGIILGVVKR GLSRALIIMV ALGWGVVRDS LGSALRTIIV
LTAAYVGVSV SRDLMLVFAI EDMETLSYDA EVELFDVVTI LTFVVAAVDV IFILWILDAL
NNTMEYLQSM NQSRKLMRYL RLRCIFLFSI LFATIWVVFS LVDTYDENGI IREEHEWSVD
AATEINYFYV LAGVAFLWRP NPSAKEYAYV MELSATGEGN DGEDTHELEL TGVVPSALDD
DDDEEPSGKS NGYHDNDHDD RFRIDDSEAA
|
|---|
| |