Gene PHATRDRAFT_46971 details

Gene Information

• Locus tag: PHATRDRAFT_46971
• ID: 7202079
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: -
• Start bp: 44406
• End bp: 46496
• Gene Length: 2091 bp
• Protein Length: 696 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002181293
• Protein GI: 219121896

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGTCT CTTCTCTCTG GAAAGTCTTG GACAAGGCCG GTTGCGCCAC CCCAGTGGGT 
ATAGCAGAGT TTACTGTTTA TGACCCACAG CACTACGCTC GTAGTCAAGA AGCACCCAAT 
GAGGCGAGTC CGTGGAATCA CAACCTGGGC GTTCGTCCAT CTGCAATACG AGAGCAACAC 
AAGGCAACCA CATTGGCGGT GGATTTGTCA ATTTGGATTT GTGAGTCCCT TACGTCCCGT 
GCGATGACGG AAAATCACGC CAATCCGGCT CTTCATCTGG TCTTTTCACG AACAATGAAA 
TTGCTTTCCC TGGGAATAAA GCTTATTTTC GTGCTTGAAG GCAAGCGACG CGTGCAAACG 
GCGGGAAAGC GAGACAATTT TCGTAATCGG CGCAGTGGCA CTACCTTTTG GAAAGCAGGT 
GAGCAATGTC ATGACTTGTT GACACGGCTT GGCATTCCAG TTTTCCGGGC CAAAGCCGAA 
GGTGAAGCTC TTTGTGCTTT ACTTTCACAG CGCAATATTG TTGATGGTGT AATTTCCAAT 
GATGGGGATT GTCTACTATT CGGAGCCCGA GTTGTATACA CGAAATTCTC GGTCGAAAAC 
CTTGTTGAAG GTAGTGTTAT GCGGTATGAC CTCGGCAATC TTCGAGCCCT GATTGACCAC 
GCCGGCGACA AAGAAGCCTC AGACCAGCTT ACTGGATCGC TTTCTCTCAG TCGTTTTGAC 
CTCCTCTCTT TTGCATTGCT CACCGGCAGC GACTTAGCAG GGAACGGACT ACCGAAGGTT 
GGGCACAAAA AGGCCATTCG TTTCATTCGA AAGTGCCAAA TCGACAACCC CCTTACGACT 
GAGATGGCCT CCATTGATGA GGTGAAATCA TGGGCAGTTG CCGCTCATGT TCGACCAACC 
AACCTGCCAC ATCAAACGAA AGCGAACGAA AAATGCTGTA GTCGCTGCTG TCATATCGGA 
ACCAAGCACA GCCACGAGAA ACTAGGGTGT GAAGCTTGTG GTACTGCTCC TGGAGAACCA 
TGCTATGCAT TCTCTACGGA AGATCGCTTC CGAAAGTCTC TCCGCGAAAA AGCTCTAAAA 
GTCATTCCGA TTTTTGAGCC TTCCCAGGTT GTTGAGGCCT ATCTGCGACC TAACGACAAT 
CAGCTCCCCG CTCAGCTGGC TGGCAAGACC TCAAATCAAA TAAAGATGGA CCCACCGGAC 
CTCAACGCTC TCTTGCAACT CCCTCTAATA CTCAAGGGTC GTAGTCAGGA AGAGAGTCGC 
GAGTACTTGG TTCGTTCAGT TGGCCGCCTC TTATCTCGTG CTGAACTATT TCGAAAGCAC 
GAGGAAAGCG ATGAAAAAGA ACTGATGACT TCTTATCGCC GAGCGCGAGA AAGACCCATT 
CCCCACAAAA TTACGAACTC AATGACGCAG AACGGAGTGC CTTCTTACGA GGTAAAATGG 
TTGGTTAACG CTACCGTGAC TGATAATTTC GGTGAAGGAA TCGATGGCTA CGAATATTCC 
ACGGTTGAAC CTTGTGACCT GATAGCGAAC CGTTACCCCG TCCTAATAAA GGAGTTTCAG 
CAAGCGGAGA AAGAGCGTAT GAAGCAAGGA GACGGAGAAA AGCTTCGTCG TTTAGACTTT 
CTACAATCGC ACCTGTTCCT TCACAGAGAC CCGCAACGTC CTTCAGAAAC CGGCGACGCA 
AAGAAGGTGA AACGATCGAA GCACCGAGCA GGATTCTTTG AGACCAAAGA AGCAAGCCTT 
CCAAAACTCT ACGCATCAAG CAGACGAAAT AATCGATCCA AGCGCAAGAC GGGAGATGAC 
GTTGGTCATT TGTTACGTTA TATTGTCCGT TCTAGCGACA TCACACAAGA TCCATTGGGA 
TTCAGTCCGA TTGACAACTC CAAATATGGA TTACTTCCTG GAACGAGCTT GCGCGGTCAC 
TGTACTCCAT CGCCGCGAAA GAACGTATAC AAATCAAAAG CTTCATTGCA CTCACCGGAA 
GGAAGGGTGT TTTGCAATAT GGGTGGTGTA TTCATTGAGA TTACGCCGAT TATATCCAAC 
CGTCGTACCT TCCCACCCCG TCACATATTC ATTCGCCGGA GTTCAGCCTA G 

 

Protein sequence

MTVSSLWKVL DKAGCATPVG IAEFTVYDPQ HYARSQEAPN EASPWNHNLG VRPSAIREQH 
KATTLAVDLS IWICESLTSR AMTENHANPA LHLVFSRTMK LLSLGIKLIF VLEGKRRVQT 
AGKRDNFRNR RSGTTFWKAG EQCHDLLTRL GIPVFRAKAE GEALCALLSQ RNIVDGVISN 
DGDCLLFGAR VVYTKFSVEN LVEGSVMRYD LGNLRALIDH AGDKEASDQL TGSLSLSRFD 
LLSFALLTGS DLAGNGLPKV GHKKAIRFIR KCQIDNPLTT EMASIDEVKS WAVAAHVRPT 
NLPHQTKANE KCCSRCCHIG TKHSHEKLGC EACGTAPGEP CYAFSTEDRF RKSLREKALK 
VIPIFEPSQV VEAYLRPNDN QLPAQLAGKT SNQIKMDPPD LNALLQLPLI LKGRSQEESR 
EYLVRSVGRL LSRAELFRKH EESDEKELMT SYRRARERPI PHKITNSMTQ NGVPSYEVKW 
LVNATVTDNF GEGIDGYEYS TVEPCDLIAN RYPVLIKEFQ QAEKERMKQG DGEKLRRLDF 
LQSHLFLHRD PQRPSETGDA KKVKRSKHRA GFFETKEASL PKLYASSRRN NRSKRKTGDD 
VGHLLRYIVR SSDITQDPLG FSPIDNSKYG LLPGTSLRGH CTPSPRKNVY KSKASLHSPE 
GRVFCNMGGV FIEITPIISN RRTFPPRHIF IRRSSA