Gene PHATRDRAFT_37300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37300 
Symbol 
ID7202057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp673527 
End bp674672 
Gene Length1146 bp 
Protein Length381 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181419 
Protein GI219122158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.139262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTGA GGGATCCTAG ACTTAGAATT GGAGGGAAGG TGACGGCAAA GGCTTGTCAT 
GTTGTGCATC TGAGCGAGTG CGCACGGAGA TATGGCATCA ACAAGCACTC CAAGCGGCTT
GTTGGAACGG TTCTAGACGT CACGACCACC CCTGTATCCA TTACAACCGG GCGTACCTCT
ACTTTGATAA CAGCAGTTTA TGATTTTGGA GAGAGTTTGT TCAAGGAAAA AACACTGAAC
ATTCGGAGTG TAAAGGCATT TGTACTGCCA GAAGATGAAG GAATGTCCTT AATTGAGGAA
ATAGCAGCAG AGACTTTGCA GACAGCAGAA GCAGACATGG AAGCCGGAAA CTTGATGGAA
GAAAGTGTCG AAGCCCCGGT AGCCGAAATG GTTGAAACCC CGGCTGACAT AGAGCCCAAT
ACCTTGGTCG ACACAGAGCC CAATACCCCG GTTGACACAG AGCCCAATAG CCCGGTAGCC
GAAATTGTCG AGACCCCAGT TGACACCAAT ACCTTGGTTG ACACAGAGTC CAAAAACCCG
GTAGCCACAG TGCACCAAAC AGAGTGGTAT GTGAATGAAA GAAAAACCCG GCTGGATGTG
AATGGCCATG TCTATGTTAG GCACTTCCAT ATCCGTACTT CAGTTGGTGA CCTTATTGGT
CAAGACTCTG ACAATGGGGT GAGATTTTCG CGCCTCGAAT ATTTCCTGCT CATGTTTCCG
CCGACCCAGC TGACTACTAT GTGTTGGCTT ACAAATACTA TGCTTGCTCA ACAAAACAAG
CATACAATTA CAGCCGGAGA ACTTCTTTGG TTCTTTGGAA TCCTCATCCT CACCACAAAG
TTTGAGTCCA GTAGCCGGGC CCAACTATGG TCCACAACTG CACCCTCCAA GTATATTCCT
GCCCCTTCAT TTGGACACAC AGGAATGTCC CGGCAACGGT TTGACAATAT CTGGAAACAT
ATCTGTTGGA GTGAACAATG TCCAGTGCAA CCGGAGGGTA TGAGCACTCA TGTTCACCAA
TGGCAACTTG TTGACAACTT TGTCACAAGG TTCAATGAGC ATTGTAGCGA AAATTTTGTA
CCTTCCCATC TGATTTGTGT GGATGAATCT ATCTCAAGAT GGTATGGGCA GGGTGGGATT
GGATAA
 
Protein sequence
MPVRDPRLRI GGKVTAKACH VVHLSECARR YGINKHSKRL VGTVLDVTTT PVSITTGRTS 
TLITAVYDFG ESLFKEKTLN IRSVKAFVLP EDEGMSLIEE IAAETLQTAE ADMEAGNLME
ESVEAPVAEM VETPADIEPN TLVDTEPNTP VDTEPNSPVA EIVETPVDTN TLVDTESKNP
VATVHQTEWY VNERKTRLDV NGHVYVRHFH IRTSVGDLIG QDSDNGVRFS RLEYFLLMFP
PTQLTTMCWL TNTMLAQQNK HTITAGELLW FFGILILTTK FESSSRAQLW STTAPSKYIP
APSFGHTGMS RQRFDNIWKH ICWSEQCPVQ PEGMSTHVHQ WQLVDNFVTR FNEHCSENFV
PSHLICVDES ISRWYGQGGI G