Gene PHATRDRAFT_37283 details

Gene Information

• Locus tag: PHATRDRAFT_37283
• ID: 7201938
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 613568
• End bp: 617034
• Gene Length: 3467 bp
• Protein Length: 1033 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002181236
• Protein GI: 219121777

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACCGT TAGAATTGTT GGCCCAGGAG CGTCTTCCAA GACGTGACTT CAACCGGAAA 
CGGGTCCCGT ACCGGGACGC GTACGTGTTG GTAGGTTGGT CGGTCACGGA TGCGTACGGG 
CACTGAGGCA AAACGGCCAA ACAGGGTTGG ACACTGCGAA TGTCGGCGAT TTCCGCCGGA 
TCTTTTGGTC ATTTCGAACC GCCTCTCGCG CAATTGCACA CTTTTGTATT TCCGGCACAC 
GACCAACGAA ACAGACCCCC AAAAAAAAAG AACCGAACGG GTATCTCTAC CGGATTTGTG 
CTACCCAACC GTACCTCGTG GTGATTGTCT CCACTCCAGC ACCACCACTA CCACCCATTT 
CCTCGTAAGA CCAAAGAGAA CACGGATATC GAAGGCACCT TTATTTCAAC AAGCCGAACG 
AGAATAGTCG AACGTCGAGT ACAGCCTTCA TCCACAGTCC CATACATTCC CACCTACATC 
CTTGGATTAA CCCACCCACA CGTCCACCGA CCAGCATGCC ACCGTCCATT CTATCGGACG 
CCTCGGGCGA TGCCTTTAAT TCACCCGAAC AATTCGTCGT GGTGGTCAAT CCCTACTCGA 
CGGGCTGTTT GATTGCCAAA GAAATGCACA AGCGCGGATA CGTACTCATT GTCGTCTGGA 
CCAAAGGCTT CTCCGCGGAT ATGAAGACGC ACATTCCCAT GAGTGCCGGG CCGATGGAGT 
ACTACGCCGA AATTGACGAA CAAGACAATC TCGACGACAC CGCCGCGCTC GTCCGCAAAA 
CGGCCAACGA ACAGGGAATC GCGGCATGCC TCGCTGGAGG CGAAGCCGGA GTAGACCTCG 
CCGACGCACT TTCCGAACAT CTCAACCTAC TCACCAACGG AACCACTATT CCCAATCGAC 
GTGACAAAAA GATTCAACAA GAACTCATTC GACAAGTAGG TCTGCGCTCC GTTCGACAAG 
CCGGGGGTGA CCAGTTCTCG GACGTCGAGG ACTTTCTCCG GACGGAACCG TATCCCCTCG 
TCCTCAAGCC CATCGAATCC GCCGGATCGG ACGGAGTCAA GCTCTGCGAG AACTTTCCGC 
AAGCCAAGGA TCACTTTGAG TTATTGATGA AGTCACAAAT GGTCAACGGA GGGTCCTGTC 
CCGCCGTACT CTGCCAAGAA TTTCTCCGCG GCAAAGAATA CGTCGTAGAT CATGTTTCTC 
GCAACGGCGT CCACAAAACT GTCATGGTAT GGGTCTACGA CAAGCGTCCC GCCAACGGAT 
CCGCCTTTGT TTACTTTGGC TGTGTCCCGG TCGACTCCAA TTCCCCGGAA GCGCTTATCG 
TCATTCCCTA TATTCGCGGC GTCCTCGACG CCATGGGGGT ACAGAACGGA CCATCGCACG 
GGGAAGTCAT GATGACCGAA GACGGTCCTT GCTTGATCGA AATGAATTGT CGCGCCCACG 
GTGGAGATGG TAACTGGAGA CCCCTCTGCC GGGCCCTCAC TGGAGGCTAC TCCCAAGTCG 
AAGCAACCGC CGACGCCTAT CTAGACGCTT TCCAATTCAA TCGACTCCCC GATAAACCTC 
CCAGTCCCTT CAAAGCGTCC GGACAAGAAA TTATTCTCGT CAGTTATTCC CAAGGGACGG 
TCCAGAGTTG TCCAGGATAC GACGTGATCA AAAGTTTACC CTCGTTCGTC TGTTTGGAAA 
CGGGCGTTAA ACCGGGATCC GAGATAGACT ACACCGTCGA CCTCTTCACC GGCATCGGGA 
GTGTCATTCT CATGCACAAG GACCCGGCTG TGTTGGACCG CGACATTGAC TTTGTCCGGT 
ATATGGAGAC CATCAACGGC CTTTTTGTGT ACGAAACCAA GTTGGAAAAT CTCAAACGCC 
CCCGTGGCGA GGCCGTTACC GAAAAGGGCC ACCGTCGCGT TTTTTCTGCG GAAGGCCCTG 
GTCTCATTCG CCACATGTCC AACGATCGTC CCGAATTGCG CAATCCGCTG GTGAAACGTA 
TGACCACGGT CGATGCCTCG CGGGAAGTGG TCGTTATAAT CGACCCTTAC TCGACTGGAT 
GCTGCATAGC GGAAGAGATT ATCAAACGGG GCTTCAACGT GATTGCACTC TGGACCGAGG 
GATTTTCTGA AGAAATGAAA AAGCATGTAC CCCTCAGTGT GGGAAATGTG ACATACTTCA 
AAGAAGTGAA TCAGGCCGAG ACGTTGGAAA AGACGGAAGC GGTAGTTCGC AAAGCGGCGG 
AACTGTTCCG TATTGTTGCC TGTATCGCCG GCGGGGAAGC CGGAGTCGAC CTTGCCGACG 
CTCTTTCCGA ACAGCTCAAG GTTCGGACCA ATGGTACCGG CATTCCCAAC AAGCGCGACA 
AGAAACTCCA ACAAGAGCTT GTCAAAAAGG TGGGACTGCG GTCAGTACGC CAAGCGGGAA 
GCGATAAATT TGCCGATGTC GAGCCTTTCT TGCGCCGAGA ACCGTACCCG GTGGTCCTGA 
AGCCAGTTGA ATCGGCCGGG TCAGATGGTG TCAAACTGTG CCACAATTAC GACGAAGCAA 
AGCAGCATTT CGGGGTACTC ATGAAATCGC AAATGGTCAA TGGGGGGGAT TGTCCAGCGG 
TACTCTGTCA AGAATTTTTG CGCGGGAAGG AGTACGTCGT CGACCACGTG TCTCGCGACG 
GTAAGCACAA AACCGTCATG GTTTGGGTGT ATGACAAGCG CCCGGCAAAC GGATCAGCCT 
TTGTCTACTT TGGTTGCGTC CCAGTAGATT CCGATTCACC CGAAGCTCGT CTATTGATTC 
CGTACGTACG CCGAGTACTA GACGCCTTGC AAATCAAGAA CGGTCCATCG CACGGCGAAG 
TCATGATGAC GAACAACGGT CCCTGTTTGG TAGAAATGAA TTGTCGCGCA CACGGTGGTG 
ACGGGAACTG GCGTCCCCTC TGCCGCGCAC TCAATGGTGG CTACTCCCAG GTCGAATCCA 
CGGTCGATTC GTACTTGGAC AGTCGTCAAT TCATGATTAC CCCCGAAAAA CCACCTAGTC 
CCTTTAAAGC TCACGGCCAG GAAGCAATTT TGGTTTCATT TTCACGCGGT GTAGTCAAGG 
CCACTCCCGG TACGTTGGAT TGCTTATCTG TGTTGAGTTG ATTCCGGCGT TTTCTATCTT 
AAAATGTTTT ACAGTCAGAG ACTCACTCAA TCCCTTCTTT ACTATGGGCA TCCCCAGGTT 
TTGAGGAAAT TCAAAAGCTC GAGTCATTCG TCTATTTGGA GACGGGTGTT CGCGTCGGCA 
CCTTTGTTGA CTACACGGTC GACCTCTTTA CCGGAATAGG TAGTGTCATC GTCATGCACC 
AGGACGAAGA CGTATTGGAA CGCGACGTTC GTCGCATTCG GCAGTTGGAA TCGGAAAATT 
TGCTGTTTGA ATACGAAACT GGCAAGGTAG TCTTTTCCTC GCCGAGCAAC ATTCACGACA 
CTGGAAGCGT GACGGTGGCC TCCGCGAACC GTCCCGACTT GTATTAG 

 

Protein sequence

MEPLELLAQE RLPRRDFNRK RVPYRDAYVL TPKKKEPNGY LYRICATQPY LVVIVSTPAP 
PLPPISSPIH SHLHPWINPP TRPPTSMPPS ILSDASGDAF NSPEQFVVVV NPYSTGCLIA 
KEMHKRGYVL IVVWTKGFSA DMKTHIPMSA GPMEYYAEID EQDNLDDTAA LVRKTANEQG 
IAACLAGGEA GVDLADALSE HLNLLTNGTT IPNRRDKKIQ QELIRQVGLR SVRQAGGDQF 
SDVEDFLRTE PYPLVLKPIE SAGSDGVKLC ENFPQAKDHF ELLMKSQMVN GGSCPAVLCQ 
EFLRGKEYVV DHVSRNGVHK TVMVWVYDKR PANGSAFVYF GCVPVDSNSP EALIVIPYIR 
GVLDAMGVQN GPSHGEVMMT EDGPCLIEMN CRAHGGDGNW RPLCRALTGG YSQVEATADA 
YLDAFQFNRL PDKPPSPFKA SGQEIILVSY SQGTVQSCPG YDVIKSLPSF VCLETGVKPG 
SEIDYTVDLF TGIGSVILMH KDPAVLDRDI DFVRYMETIN GLFVYETKLE NLKRPRGEAV 
TEKGHRRVFS AEGPGLIRHM SNDRPELRNP LVKRMTTVDA SREVVVIIDP YSTGCCIAEE 
IIKRGFNVIA LWTEGFSEEM KKHVPLSVGN VTYFKEVNQA ETLEKTEAVV RKAAELFRIV 
ACIAGGEAGV DLADALSEQL KVRTNGTGIP NKRDKKLQQE LVKKVGLRSV RQAGSDKFAD 
VEPFLRREPY PVVLKPVESA GSDGVKLCHN YDEAKQHFGV LMKSQMVNGG DCPAVLCQEF 
LRGKEYVVDH VSRDGKHKTV MVWVYDKRPA NGSAFVYFGC VPVDSDSPEA RLLIPYVRRV 
LDALQIKNGP SHGEVMMTNN GPCLVEMNCR AHGGDGNWRP LCRALNGGYS QVESTVDSYL 
DSRQFMITPE KPPSPFKAHG QEAILVSFSR GVVKATPGFE EIQKLESFVY LETGVRVGTF 
VDYTVDLFTG IGSVIVMHQD EDVLERDVRR IRQLESENLL FEYETGKVVF SSPSNIHDTG 
SVTVASANRP DLY