Gene PHATRDRAFT_37268 details

Gene Information

• Locus tag: PHATRDRAFT_37268
• ID: 7201931
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 558455
• End bp: 564344
• Gene Length: 5890 bp
• Protein Length: 1865 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002181227
• Protein GI: 219121758

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.645144
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCGCC GGCGCACGCG GCAGAAAGGT ATCGGTAGGA TGCCGGGGGT GAGTGTGAGT 
GTACCCAGCG AACGGTACAT CCTCAGTTCG AAGCGCTGTG GGCATTGGGG CAAGGAGTCG 
GATCTGTGAA CAAGCTTGTG CGCCGTACTG TAAATGACAG TGAGTCGTTC AAAGTTGTAG 
CGTCCCAAGT TGATTACAAA CGTTACGTAC GGCACCGCAA GGCAACGGCG ACCCCGTTGA 
GACCCATCGT TCCATCATGT TGGGGAAACT CGCTACGGTA AGTGGACGTC GCGGTAGTTA 
CGCTCGGTAG TGGATACGGT AGTCGAGGCT TATCCGTCGT CTCACACACG TCCCTCTTTC 
TCTTACTTAT CCCTTACTTG GATATTCTTC TATGTATCCC ACTACATATT TGTTCCCCCG 
TTCAGCAATT GGCCCAGCAG CGTCTAATGT TTGTGGAAAA ACCCGCGACG GACGACGCGT 
CGCGACGACC CCGAAGCCAC CGTGACACGC GGTCTCTGGG CAAACACGCG GCCGTCAAAC 
AGCGCATGAA GGCGCAACAA CAAAAGCAAG GACAGACACC ATCACCGTCC CAAAAGCGTT 
TTCGAACGGT GCTTAGCATT GAAACGGCCG ACGCGACCGC GTCGCCCTCC TTGGCGGAAC 
CCGAGCCGCA CACGGAACCC TTGCGGGTCG CCGTGACCGT GGACGAAGAC GACAATCAAG 
GAGCGGCTTT GCCGACGTCT ACCCCCGTTT TGGGTAATAG TGCACCCTCC GACTTGTTCC 
GGGACGTGGA AGCGGCGCTG CACACCGACT GCGATATTCA CGTCTCGCTC GACGACGAAC 
CAGAGGTCGC ATCGCAGACT CGGGATGGAT CCTACTGGGC CATGTTTGGG GATACTCCGG 
AACGGTGGAC CGGTATTGAT ATGACCGAAG AAGTCGCCAT GAGTCTACTA GACACGTCCC 
TGATTAGTGT CTCGACAAAA GAGCCGGAGG AGGACGACTA CGACGGCAAA GATAGTCACG 
GTGACGACGC CCCAGCCACG GTCAACAAGA CAATTACCGC TGCCACGGAC ACGACGCCTT 
TGCATTTTTG GAAAACCTGG CGATCGCAGC CAGTGACTCC CGCATTGGTC CGGATTCAGT 
CGCCGTCGTT CACTGCTGAA GGGGCTACGC CCGACGACCC CGAACGGCAT TTCCGCAACG 
TAGACAGCGA ACAACCTCTG TACGCTGCCG ATCGGGTAGC CTTTACCACC TTTCGGCAAA 
ATTCCACACA GATTGCCTTG CAGGAAAGCA AGACCTATCT CGATCGGATC GCACAATTGG 
AAGAGGCCTT GGCCAACGCC GAGTACGAAC GGGATTGTGA AACGCAGCGG CGCATAGAAG 
CGGAATCTAC CGTGTCGGTG CTGCAGTCGC CGTCGTCGTC GGTTCCCAAC CACCCGGCAC 
CAACCCCCAA GGCAATGCTC CATCCTCCGG TCCCATCCAC TCCGTCATCC CTCCCGGATG 
TGGAGTCTCT CTGGGAACGC AACAAAACAC TCGTCAAGGA AGTACGCTTT GCCGATCAAA 
CGTGTATGGA ATTGTCTTCC GAGAAGACGG CCTTGGAACA GAGGATCGAG CACTTGAGCG 
AGAACATTAC ACGGTTGGAT CAAGAAAACA CATTGTTGCG CGAGCAACTC GGACGGGCCG 
AAGAGACGGT ACGGCAGGTC AAGACCGACA CCGAAACCGA CAATGCCGCC TCTCCCTCAG 
ACAAGGATCG TACACGACGG GCCTTGGAAG AGTTCCCTCG TCCAATCGAT CGTAAGGAAG 
GAATGGGCCC GTCCCTTGGC GAGCACATCG CGAATATGGC TTCCCGAGAA CCGTCCACGA 
TGGAGAACCC GTCCGATCGG TGTCACACTG CCCAGTCGGA GAATCCATCG CTACGGGAAC 
GGTTGGAGGT CACCTTGGAA GAGCGAACGG CGGCGCTTCG CCAATGCGAA AGTTTATCAG 
CCCGTGTCTC GGAATTGGAG GCATTGGAAG GCCGTCACCA CAGAGATTTG GAAACGACAG 
CGGCCCGGTA CGATGATCTC TTCCGACAGC TTGAAGAGGC TCACCAGAAG TTGACTGTGG 
CCAACCAAAC GATAGTCGAG GGTGACGAGT GTCGGGAATT GCTGCAACGC CGATTGACGA 
GTGACGCCCA ACGGACTGAC GAACTAGAGC AGTCGCGCTT GTTATTGCAA AAAGCCAACG 
ACGACGTGGC TCTTTGGAGG ACCAAGTTTG CAGACGGCGA GGGGGAAATT CGCTGTTTAG 
AGGGTCGCAT TCGGGAGCTC ACCTCCAGCG GTCACGACAG CTCAAGGGCT GCCGGCCTGC 
TTCGAAAGGA ATTGGGAAAG GTTGCGGAGG AAAAACGCGA GCTGTTGGTC GAGCTGGAGG 
CGGCCAACGA GAAACTCGCT GTATGTGAGA CCAAATTGGA ACAGTTCGAA AAGGATGGGC 
AGGAACTCGA GGCAACGCGA AGTGAGCTTG ATGCCCTCCG TAACGAAGAG ACGTTACGAA 
ACGAGCAACA CACTGAACGG GAACGTCAAT TCTCATCAAA ACTCGCCGAT ACCCTCTCGC 
GGATCGAGAC TTTAGAGCTA GACGCTGCAT CTGCGATTAA ACAAAAAGAC GAACAATCGC 
AAGAGCTCGA TGCGGCACTT GGGCAACTCG ATTGTTTAAG AAGAGAAATT GACGATCTAA 
AGGAAGCACG CTTGAGTGAT GAAAACTTGT TCCAGCAGAA GCTGAGTCGC GCTAGCTGTG 
ATTTGGAAGT AGCCCACACA GATATTGCCG TTGCCCGAGA CGCATGGCGC CAGAAGGAAA 
GCGAACTGTT ATGGGCGGTA CAGAAGGTAG TTGCCCAGAC CGAGAGCCAG GCCACTATCT 
TGGAAGAGAG ACTTGTCAAC CGTCACGGAG AACTCGTAGC TCGAATGGGT CAGGCAGTGG 
AGGCAGTCTC GTACGTGAGA GAATCAATCA TTTTTGGAGA CAGTACTACT GCTGTCGATA 
CTGTGAGTGC TGCCCATGGG CTGGCGGAAT CGGCACCCGC GACACCACTT CCTAGTGACG 
GTGCTTTAGA TGCAACATTC GATAATCCCG GAGGCGCATC GACAGATCTA GAGTTAATGG 
AAGAAGCTAG GCCTCATGGT TTCGCCGAGT CGTATGGCGT CCACGAGACC GAATTCGATT 
TTACCGTGTC ACTACCGCTA GACACCGACA CGATGTCTAG CATTGCCGGT ATTTCTCATT 
TGTTTTCTTT ATCGCCGGTT TCTATCGATC AATCCCCCAT GGAGAATACC CACAATACCA 
CAACTTTACT GCGCCCGCGA GGCAAGGAAC TCCAGAGCCC GAGGCGACGG ATCAACGAAT 
TGATTTGCCG TACCTCGGAA CTGGAAGAAC AGAAAGAGAT TGCACTGCAG GACGTCATCG 
TCTTACAGCA ACGGGTGGAA GAACTCGAAT CGGAGCTCCA TGCAATGGCC AAGGATCTCT 
CACTAGCATG CAAAGAGAGA AACGCCGTAG CAAAAATCAG CAATTTTCAC AATGGCTGCA 
TAGAAGCAAC CCTGAAAGAA AACGACACAA ACCTTTGTCA AGTAGAGAAG ACCGACTCTG 
ATACCACTGC ATCGGCAGTT TCAATCCATG TCAACGAGGT CATAGAAAGC ATTTTCTCTC 
GCAAAGGAGA GACCTTTATC TCCGAGTCTG AAGTCGCCGA CAAGGTTTCC CGAAGCGAAA 
GAGACATCGA GGGACTTGGA TTGGACCGAA GCATTTTGGA TCAGCGCCTA ACGACAACCA 
ATGACAAGAA AGGAGAGATA GCGGTTGCAT TGGTGGCTGA CAACGAACAG ATCGACGATA 
ATACCTCTGA GATTGTGTCG TTGAGATTGC ATTGTGGATC TCTTTCGAGT GATACGGACA 
AAGTGGTGGT GCTTCGGAGA TTGGAAGACT TGGAAGCCAA ACGTGACAGT ATGCGGGATT 
CATTTTCCAG CATCCAAGAT TTACCTAAAA GGAACGAGAG GAAATTTTTT GAATCCAGGT 
TTGAGTCAAT GACGAATGAT TGTGCGAAGG CTAAGGAGAG AATCGAAGAG CTTGAAGCAC 
TGCTAGGGGA AAAGACAAAG CAATGCCAAG AGCTCGAGGC TCACATTGCT ACAATTCAAG 
AATCGTATGC GGATGCCAAA GTAGAAAAGC AAATCATTCA AGAGTCGATG GAAATAAGTC 
TGTCTCAAAA GATAGCCGAG TCGCAGCAGG CAGCCCAGAT ACGACTATCT GCATCGGAAG 
AACAGCTTGC CATCGCTCGA GATGAAATCG CTTTGCTTCA TTCGCTTCAC AAATCGGTCA 
CATCAGAGAA AAAGGAAAGT GCCACTAAGA TTGCAAGTCT GCAGGAGGCT TCCAGCAAGC 
AACTGACCGA ATTGAAGAAG GCGAATGAAT CTTTAGACAT AATTGGCCAA GAACGAGATG 
ACTTGTTGAA GAGCTTGTCG AAGCTTCAGT TCGAAAATGC CGACGCCAAC AGCGAAATGG 
AAAAACACCA GGAAGCCCTC TTCGAGACTC AAGAAAGCCT TACCGAGTGC CAGCTGAAAT 
TATCCGTCCT AGATGCCATC ACCACCGAAA GAGACTCCTT GCTCAACAAA ATTACTGAGC 
TTGAGCTGGA ATGCACTGGG CTGAAAACTA CTATGACTGA AAGTTCGGCT ACCGAACGCA 
AGTCTTTGGA ACACACGCTC TCGTCACTAG AAGAAATTCA GGTCGAAAGA AAATCTCTTC 
TGGAAAATTT GGATTCCGCG AAAATCGAAA ATGGACTCGT CAGGAAACAG CTAGATTCTA 
TGAAGGCTGA GCTTGAAGAC GACAAGCGAA CGAGCGCTAA ACTTCGCGAA TTGTACGAGC 
AGCAAGTTGA AGCCAACGCT GAATTGCGAA GGGAAGTCTT CCACTGCAAA GGTCTCGTGG 
ACGATTCTGA TTTTGCAATG CAGGATCTCA AAGAGAAATA CCTCGAGTGC AATGAGAAGC 
TTGCGAATTT TTGTTTTTTA CACAATTCTA ATGAAGAATC CAAGCTGATG TATGATCGTG 
CTCGTGAATC CGCTGAAGGG CTTGCAATCG AAAGCCAAAG GCATCTCGCA AAAGCCCGGG 
AAGACCTGGA AACAGCACTT TCCGAAAATG GCAAAATGCA AGCAGAGTAT GAAAAATCCC 
AAGAGGTCCT CTCCGATGTC CGACGAGAGC TAGCAGAGCG AAAGGAAGCT ATCAAGGATT 
TAGAAGTGTC GCGAGAAGCA GCTATTATGG GGCTTGCTGA ATACAAAGAA CAACTCAATT 
CGCTGGAAAT TTCTCTCGAT AAACGGACGC AGACTGTGAA TCAGCTCCAA GCCGACGTTA 
AGGAACGTGA CGACGCTCTT TCGAAGTTGG ACCAACATAA TGCTGAAATC AACGTGTGGG 
AGAAACGCAT ACAGGAGTCA AACGATGCTC TTTCCAGACT GCAGGATCAG CTTGACGAAA 
GCACGGCATC CCTGCGTACT ATGACTAACG AATTCAAAAT GGCATCGACG CGAAGCGATC 
ATTTAGAACT AAAGTGTTCC CGTCTTCGAG ACTACATTCG GAAGGTGACT GGCAAGTGTG 
ACCAGTGGGA AGACTTTTAC GATCGACAGG CTGAGGTTGT GGAGGGCCTG AAGCGTGCCA 
ATGAGCGGAC TCGTCAAAAG ACTGCTGAGC TCGCTCGTCG GTACCAGGAA CGAGACCAAA 
TTCATGACAA AGAGCGTGCC GTTTGGACAG CGCAGAAGTG CAATCTGGAC TTTATACATT 
CGCAGCTAGA AGAAGAGTTG CATGGGATCG CCAACGAGCT AGCGCATGTC GAAAGCCGGC 
CAGTTTCGAG TTAATGCTTA ACTGTGAAGT CAAATGATTA CCTAATCTCC AGCCCAGTTC 
CGCTGTTTAA 

 

Protein sequence

MSRRRTRQKG IGRMPGVSFE ALWALGQGVG SVNKLVRRTV NDSNGDPVET HRSIMLGKLA 
TQLAQQRLMF VEKPATDDAS RRPRSHRDTR SLGKHAAVKQ RMKAQQQKQG QTPSPSQKRF 
RTVLSIETAD ATASPSLAEP EPHTEPLRVA VTVDEDDNQG AALPTSTPVL GNSAPSDLFR 
DVEAALHTDC DIHVSLDDEP EVASQTRDGS YWAMFGDTPE RWTGIDMTEE VAMSLLDTSL 
ISVSTKEPEE DDYDGKDSHG DDAPATVNKT ITAATDTTPL HFWKTWRSQP VTPALVRIQS 
PSFTAEGATP DDPERHFRNV DSEQPLYAAD RVAFTTFRQN STQIALQESK TYLDRIAQLE 
EALANAEYER DCETQRRIEA ESTVSVLQSP SSSVPNHPAP TPKAMLHPPV PSTPSSLPDV 
ESLWERNKTL VKEVRFADQT CMELSSEKTA LEQRIEHLSE NITRLDQENT LLREQLGRAE 
ETVRQVKTDT ETDNAASPSD KDRTRRALEE FPRPIDRKEG MGPSLGEHIA NMASREPSTM 
ENPSDRCHTA QSENPSLRER LEVTLEERTA ALRQCESLSA RVSELEALEG RHHRDLETTA 
ARYDDLFRQL EEAHQKLTVA NQTIVEGDEC RELLQRRLTS DAQRTDELEQ SRLLLQKAND 
DVALWRTKFA DGEGEIRCLE GRIRELTSSG HDSSRAAGLL RKELGKVAEE KRELLVELEA 
ANEKLAVCET KLEQFEKDGQ ELEATRSELD ALRNEETLRN EQHTERERQF SSKLADTLSR 
IETLELDAAS AIKQKDEQSQ ELDAALGQLD CLRREIDDLK EARLSDENLF QQKLSRASCD 
LEVAHTDIAV ARDAWRQKES ELLWAVQKVV AQTESQATIL EERLVNRHGE LVARMGQAVE 
AVSYVRESII FGDSTTAVDT VSAAHGLAES APATPLPSDG ALDATFDNPG GASTDLELME 
EARPHGFAES YGVHETEFDF TVSLPLDTDT MSSIAGISHL FSLSPVSIDQ SPMENTHNTT 
TLLRPRGKEL QSPRRRINEL ICRTSELEEQ KEIALQDVIV LQQRVEELES ELHAMAKDLS 
LACKERNAVA KISNFHNGCI EATLKENDTN LCQVEKTDSD TTASAVSIHV NEVIESIFSR 
KGETFISESE VADKVSRSER DIEGLGLDRS ILDQRLTTTN DKKGEIAVAL VADNEQIDDN 
TSEIVSLRLH CGSLSSDTDK VVVLRRLEDL EAKRDSMRDS FSSIQDLPKR NERKFFESRF 
ESMTNDCAKA KERIEELEAL LGEKTKQCQE LEAHIATIQE SYADAKVEKQ IIQESMEISL 
SQKIAESQQA AQIRLSASEE QLAIARDEIA LLHSLHKSVT SEKKESATKI ASLQEASSKQ 
LTELKKANES LDIIGQERDD LLKSLSKLQF ENADANSEME KHQEALFETQ ESLTECQLKL 
SVLDAITTER DSLLNKITEL ELECTGLKTT MTESSATERK SLEHTLSSLE EIQVERKSLL 
ENLDSAKIEN GLVRKQLDSM KAELEDDKRT SAKLRELYEQ QVEANAELRR EVFHCKGLVD 
DSDFAMQDLK EKYLECNEKL ANFCFLHNSN EESKLMYDRA RESAEGLAIE SQRHLAKARE 
DLETALSENG KMQAEYEKSQ EVLSDVRREL AERKEAIKDL EVSREAAIMG LAEYKEQLNS 
LEISLDKRTQ TVNQLQADVK ERDDALSKLD QHNAEINVWE KRIQESNDAL SRLQDQLDES 
TASLRTMTNE FKMASTRSDH LELKCSRLRD YIRKVTGKCD QWEDFYDRQA EVVEGLKRAN 
ERTRQKTAEL ARRYQERDQI HDKERAVWTA QKCNLDFIHS QLEEELHGIA NELAHVESRP 
PSSAV