Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37241 |
Symbol | |
ID | 7202028 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 494717 |
End bp | 496170 |
Gene Length | 1454 bp |
Protein Length | 281 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181387 |
Protein GI | 219122091 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.224864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCA ACGGAAAGTT CATCGGATTT TCGGCGGGTA AAATGGCTTG TCTGGACGTC AATGAAATGG CCATTACATC CCCAATACTT GGTTTATGTC ATATAAATTA GGCTTAATGC ATTGTCCGAC ATGCCAGTGA GGGATCCTAG ACTTAGAATT GGAGGGAAGG TGATGGCAAA TGCTTGTCAT GTTGTGCATC TGAGCAAGTG TGCACGGAGA TATGGCGTCA ACAAGCACTC CAAGCGGCTT GTTGGAACGG TTCTAGACGT CACGACTATC TCTGTACCCG TTTCAACCGG GTGTACCTCT ACTTTGATTA CAACAGTTTA TGATTTTGGA GAGAGTTTGT TCAAGGAAAA AACACTGAAC ATTTGGAGTG TAAAGGCATT TGTACTGCCG GAAGATGAAG GAATGTCCTT AATTGAGGAA ATAGCAGCAG AGGCAGCAGA AGCAGACATG GAAGCCGGAA ACTGGATGGA AGAAAGTGTT GAAGCCCCGG TAGCCGAAAT AGTTGAGACC CCGGCTGACA TAGAGACCTG CACACAGAGC CCAAACCTTG GTCGACACAG AGCCCGATAG CCCAGTAGCC GAAAATGTCG AGAACCCGGT TGACACCAAT ACCTTGGTTG ACACAGAGTC CGAAAACCCG GTAGCCACAG TGCACCAAAC AGAGTGGTAT GTGAATGAAA GAAAAACCCA GCTGGATGTG AATGGCCATG TCTATATTAG GCACTTCCAT ATCCGTACTT CAGTTGGTGA CCTTATTGGT CAAGACTCTG ACAATGAGGT GAGATTTTCG CGCCTCGAAT ATTTTCTGCT CATGTTTCCG CCGACCCAGC TGACTACTAT GTGTTGGCTT ACAAATACTA TGCTTGCTCA ACAAAACAAG CATCCAATCA CAGCCGGAGA ACTTCTTCGG TTCTTTGGAA TCCTCATACT CACCACAAAG TTTGAGTTCA GTAGCTGGGC CCAACTATGG TCCACGACTG CACCCTCCTG ACAAAGAGGG TGACAAGGAG GATGAATATC TACCTCATGG TGCAAAGATT ATCAAAGAAT TTGTTTGTCC TTGGTGAGGG AGTTCAGATT GTGTGTGCTG ATTCTTATTT TGCCTCCATT GTGACAGCTG TCAAGCTTAA GAGGATTGGC TTGAGATTCA TTGGGGTTGT GAAGTCAGCA ACGAGAATAT ATCCAAGACA CATGGTTAGC CTACTGCCAA TGTACAGGAA TAGGAAAGTC TGCTGGACGG GAAGAAAAGC AGAAGGATTT CTACATGCCC TTAGCCGAGG AGCTGGTTGA CAACCAGTAC AATAGTGTTG GAAGTCGCAA AGTTGGGAGG GATGAGTTGG ACAAGGATAG CCCAACAATC TCCAGAACTG GAGAGCCACA ATTTGGTCTC TCCACACATC TAACACCCAC CAAAAGAAAA AGAAAGAACA AAGATGTACT ATAA
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Protein sequence | MTVNGKFIGF SAGKMACLDV NEMAITSPIL GLFYDFGESL FKEKTLNIWS VKAFVLPEDE GMSLIEEIAA EAAEADMEAG NWMEESVEAP VAEIVETPAD IETCTQSPNL ESENPVATVH QTEWYVNERK TQLDVNGHVY IRHFHIRTSV GDLIGQDSDN EPENFFGSLE SSYSPQSLSS VAGPNYGPRL HPPDKEGDKE DEYLPHGIGK SAGREEKQKD FYMPLAEELV DNQYNSVGSR KVGRDELDKD SPTISRTGEP QFGLSTHLTP TKRKRKNKDV L
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