Gene PHATRDRAFT_37241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37241 
Symbol 
ID7202028 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp494717 
End bp496170 
Gene Length1454 bp 
Protein Length281 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181387 
Protein GI219122091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.224864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCA ACGGAAAGTT CATCGGATTT TCGGCGGGTA AAATGGCTTG TCTGGACGTC 
AATGAAATGG CCATTACATC CCCAATACTT GGTTTATGTC ATATAAATTA GGCTTAATGC
ATTGTCCGAC ATGCCAGTGA GGGATCCTAG ACTTAGAATT GGAGGGAAGG TGATGGCAAA
TGCTTGTCAT GTTGTGCATC TGAGCAAGTG TGCACGGAGA TATGGCGTCA ACAAGCACTC
CAAGCGGCTT GTTGGAACGG TTCTAGACGT CACGACTATC TCTGTACCCG TTTCAACCGG
GTGTACCTCT ACTTTGATTA CAACAGTTTA TGATTTTGGA GAGAGTTTGT TCAAGGAAAA
AACACTGAAC ATTTGGAGTG TAAAGGCATT TGTACTGCCG GAAGATGAAG GAATGTCCTT
AATTGAGGAA ATAGCAGCAG AGGCAGCAGA AGCAGACATG GAAGCCGGAA ACTGGATGGA
AGAAAGTGTT GAAGCCCCGG TAGCCGAAAT AGTTGAGACC CCGGCTGACA TAGAGACCTG
CACACAGAGC CCAAACCTTG GTCGACACAG AGCCCGATAG CCCAGTAGCC GAAAATGTCG
AGAACCCGGT TGACACCAAT ACCTTGGTTG ACACAGAGTC CGAAAACCCG GTAGCCACAG
TGCACCAAAC AGAGTGGTAT GTGAATGAAA GAAAAACCCA GCTGGATGTG AATGGCCATG
TCTATATTAG GCACTTCCAT ATCCGTACTT CAGTTGGTGA CCTTATTGGT CAAGACTCTG
ACAATGAGGT GAGATTTTCG CGCCTCGAAT ATTTTCTGCT CATGTTTCCG CCGACCCAGC
TGACTACTAT GTGTTGGCTT ACAAATACTA TGCTTGCTCA ACAAAACAAG CATCCAATCA
CAGCCGGAGA ACTTCTTCGG TTCTTTGGAA TCCTCATACT CACCACAAAG TTTGAGTTCA
GTAGCTGGGC CCAACTATGG TCCACGACTG CACCCTCCTG ACAAAGAGGG TGACAAGGAG
GATGAATATC TACCTCATGG TGCAAAGATT ATCAAAGAAT TTGTTTGTCC TTGGTGAGGG
AGTTCAGATT GTGTGTGCTG ATTCTTATTT TGCCTCCATT GTGACAGCTG TCAAGCTTAA
GAGGATTGGC TTGAGATTCA TTGGGGTTGT GAAGTCAGCA ACGAGAATAT ATCCAAGACA
CATGGTTAGC CTACTGCCAA TGTACAGGAA TAGGAAAGTC TGCTGGACGG GAAGAAAAGC
AGAAGGATTT CTACATGCCC TTAGCCGAGG AGCTGGTTGA CAACCAGTAC AATAGTGTTG
GAAGTCGCAA AGTTGGGAGG GATGAGTTGG ACAAGGATAG CCCAACAATC TCCAGAACTG
GAGAGCCACA ATTTGGTCTC TCCACACATC TAACACCCAC CAAAAGAAAA AGAAAGAACA
AAGATGTACT ATAA
 
Protein sequence
MTVNGKFIGF SAGKMACLDV NEMAITSPIL GLFYDFGESL FKEKTLNIWS VKAFVLPEDE 
GMSLIEEIAA EAAEADMEAG NWMEESVEAP VAEIVETPAD IETCTQSPNL ESENPVATVH
QTEWYVNERK TQLDVNGHVY IRHFHIRTSV GDLIGQDSDN EPENFFGSLE SSYSPQSLSS
VAGPNYGPRL HPPDKEGDKE DEYLPHGIGK SAGREEKQKD FYMPLAEELV DNQYNSVGSR
KVGRDELDKD SPTISRTGEP QFGLSTHLTP TKRKRKNKDV L