Gene PHATRDRAFT_37227 details

Gene Information

• Locus tag: PHATRDRAFT_37227
• ID: 7202180
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: -
• Start bp: 450370
• End bp: 455890
• Gene Length: 5521 bp
• Protein Length: 1144 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002181379
• Protein GI: 219122075

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACCA AGTCTACTCC CAAAGACCTC ATTGACTCGT TTCCGCACAG CAAACTCACC 
CCGATTGCTA CCGCGACAAC CGAACCCGAT TACTTGTCGC TCCATCAGCT TCAGTATGAA 
ATCAACGACA ATGCGGAGAC CCTTTCCTCC ACTCTTGGAG ATGGCCAACA CGGTCACCTT 
TTTCTCGTAA TTTCCGAAAC CGAGTACCTC GAAATGACCG ACGGCATTCC ATGCATTCCT 
CCTGTGCAAC CGCCTTTCGA CCCAGTTCAC GCTGCCAACG CCACAGCCCC TCAAATTGTC 
GAAGCTAACC GCCAGAACGA CAAACGATAA AAGCTGTTTG ACCTCTATCA CAACGCCATC 
AAAGCGTTTC GCAATCAACT CCTTGAAGCC ATTCCCATCG AATACATCGA ATCTCTCGGT 
CATCCTACAC GAGGCTTTAA CAAAGTCTCT CCCCTCAAAA TCCTCTCTCA TCTTTGGGAA 
ACCTTTGGTA AAATTCAGGC TTCGGATCTC ATCGCCAACG ACGAACGCAT GAAAGCCGCC 
TGGCATCCAC CAACGCCTAT CCAGCAACTC TTCCAGCAGC TTGAAAAAGG CAATCAGTTT 
ATCATTGCGT CTGGCCAAGT CATGGACGAA CGTATTATCG CTCGCATCGG CTACCAGATC 
ATCGAAAAAA CCGGACTCTT TGATCTTGCT TCTCGCGACT GGCATTATAA AGATGAAGCC 
GATAAAACTT TGGCAAATTT CAAAAAACAT TTCCAGAAGG CCAACAAGGA TCTTGCCCTC 
ACCGCCACCA GCAGCTCTGC GGGTTACCAC ACCGCAAATC AGAGTACTGT CATCAAGGGC 
AAATCGTATT GCTGGACACA CGGCATCGTG CACAACACGA AGCACACCAG TGCAACATGT 
GAAAAACAGG CCCCGGGGCA CAAAACCGGC GCTACATTGC ACGACAAACA AGGCGGGTCG 
ACCAAGACCT ATCAATACAC GCCACCGGTG CCCAAATAGG AAAGAGGGAC GGCCAAACTG 
TTGAGTGTGC CGCTGAATAC TTATCATAAC AAAAATAAGT CTTCAGTTGC ACCAAACACT 
CCTCCGTTAG CTTCCTCCCC GCCATTTTTT CCTCCCGACG CCATTGCAGA CACTGGCTGT 
ACCGGACATT TTTTGAGCAC CAACATTGCT CACATACACT GCCAACCGAC AGTCCCCGGC 
ATCAACGTGG TCCTCCCTGA TGGTCGCACA ATTACTTCAA GTCACATCAC CGAACTCAAC 
ATTCCTTCGC TTCCTCCGGC AGCTCGTACC GCCCACATCT TTCCTGGTCT CTCGAATGGA 
TCCCTCATTT CCATCGGCCA ACTTTGTGAC CACGGCTGTA CCGCCACATT CACATCCGAC 
GCGGTCAGCA TTGAGCTCAA TAACACTGTC GTTCTTCGCG GCGGCCGTTC TCCTTGCACC 
CGATTGTGGA CCCTAGACTC CCCTGTAACG CCAAATCCTC CCGCCACTGA ATTGCATGCG 
CCTTTGCACG ACAAAAATTT TGCGAATCAC CTCGGAGACC ACTCAGGGAC CCTTGCCGAC 
CGCATTGCCT TTGTTCATGC ATCCTTATTC TCGCCACAAC TTTCGACATG GTGCAAGGCC 
ATTGACGAAG GCCGCCTCAC AACCTTTCCG GACATCACGT CTGCACAGGT AAAACGGCAC 
CCCCCACAGT CCGTCCCTAT GGTCAAGGGA CACCTTGACC AGCAACGGTC CAACTTGCGC 
TCAACCAAGC CCAAGGTCAC CCTGTGTGCC TCTGTTGATC CTGACGACAT TAATTTCGAC 
ACCAATCCCG TCGTACAAGA CCCTCCAGCC GCCAGGACGC AGTTTTTGTA CGCCGATTTC 
GCCGAAGTCA CCGGAAAAAT TTTTACCGAC CCCACCGGCC GTTTCGTTAC CACTTCAAGC 
TCCGGCAATG CTTACATGCT AGTGGTCTAT AATTACGACA GCAATTTTAT TCATGTCGAA 
GCCATGAAGA ACCGCACCGG TCCCGAGATC TTGAGCGCCT ACCAGCGTGC CCACGCCATG 
CTGTCCTCCA AAGGTCTGCG CCCCCAACTC CAACGCTTAG ACAACGAAGC CTCAACTGCA 
TTACAACAAT TCATGTCCTC TGTCAATATT GATTTTCAAT TAGCTCCGCC TCACGTGCAC 
CGTCGGAACG CCGCCGAACG GGCCATCCGC ACGTTCAAAA ACCACTTCAT TGCAGGTCTG 
TGCAGCACAG ACAAAAACTT TCCGCTTCAC CTTTGGGATC GCTTACTCCC ACAAGCCATC 
ATGACTCTCA ACCTTCTTCG AGGGTCTCGT ATCAACCCAA ATCTGTCGTC CTGGGCCCAA 
CTCCACGGCT CGTTCGACTA CAATCATACC CCTCTGGCTC CCCCGGGCAT CCGCGTGCTT 
GTACACGAAA AACCGTCAAT TCGCAGAACT TGGGCCCCCC ACGCAGCCGA CGGTTGGTAC 
GTTGGCCCCG CCATGAACCA TTACCGATGC TATCGCGTCT GGGTCAAGGA GACCACCAGC 
GAACGCATTT CGGACACTCT GACCTGGTTT CCCAGCCAAG TCAAAATGCC CAGCACCTCG 
TCTCGCGATA CAATTGTCGC CGCTGCTCAC GATCTTGCCC ATGCTCTGGC ACATCCCTCT 
CCTGCGTCGC CTTTATCACC TCTTTCGGTC AACGAACGCG AAGCCCTCTC GCAACTTTCA 
GATATTTTTT CCAAAGCCGC TAACCCAGTT GACTCGTCCC TCCCAGTTGC TCCCACGGCA 
ACCCTAAGTC CGCCAGCTGC ATCTACTTCT TCACCGCGTC AAGTCCGCTT CCGAAACCCG 
GTCACTGAAT CACTTCCAAG GGTGCCGACC GCCACAGCCG CCCCTCCGCA GTCACTTCCG 
AGGGTGCCTC CCCCGGACTC CGAGGCCGAG ACATACAAGC TTGTCACCTG CAACCCTCGC 
CAAGCACGTC GTAGGGCCGC TCGCAAACTG AAAGAAAAAA TTTCTGCTCC AACATCCGTT 
GTTCCTACCC AAGCAGCACC CGCACCCGTC GTACCATCTC CCAAGGTCCC AACACCTCCG 
CACAGTCACG GAACTCGCTT GCAAGCCGCT CTATACCCAG ACGCGTTCGA CAGCGCCAAC 
GCCGTCGTCG ACCCCAATTC TGGAGCCACT CTCGAGTATT CAAAACTCAA AAATTCCGAA 
CACGGCCCCG AATGGATTCA GGCCGCTGCC AACGAGATGG GCCGCCTATC CCAAGGCGTT 
AAACCCAACA TGCCCACCGG CACCGACACG ATGCATTTTA TTCCGCATAC CGCGAAGCCG 
CACGACCGCA AGGCCACTTA CCTGAAGATC GTAGCGGCTA TCAAGCCACA CAAGGCCGAA 
AAATACCGCA TCCGTTTCAC TGTCGGCGGC GACCGTATCG AGTACAACGG ACCCACAAGT 
ACCCCTACAG CTGCCTTACC AGCCATCAAG ATCCTCATCA ACAGCGTAAT TTCCACTGAA 
GGCGCACGCT TTATGACCTG CGACCTCAAG GATTTTTATT TGGGCACTCC TCTCCCCGTG 
TACGAGTACA TGCGCATCCC TGCAGTCCAT ATACCGGACT GCATCATGGA ACAGTACAAG 
CTTGCCCCGC TAGTTCACAA CGGCAACGTT CTAGTGGAAA TTCGAAAAGG AATGTACGGT 
CTCCCACACG CAGGCCGCAT TGCCAACAAC CGCCTCATCG ATCATTTAGC TCTCGACGGA 
TACCATCAGG CCCAGCATAC CCCAGGCTTC TTCACCCACG AAACGCGCCC TATTTCATTT 
TCACTAGTTG TTGACGATTT TGGTGTTAAA TACGTGGGCA AGGAACATGC CGAGCATTTA 
CTACACTGTC TCGAGAAGCT TTACACGGTA ACGACAGATT GGACCGGTGC CCTTTACTGC 
GGTCTCACCT TTACTTGGAA TTACAAACAG CGCCACGTTG ACATGGCCAT GCCTGGCTAC 
GTCGAAAAAG CTTTACAACG TTTCCAACAT CCGTCCCCAG CCCGACCTCA ACATTCTCCT 
CACGCGTGGG TTCCGCCATT GTACGGTGTA AAAATTCAGC TAACCAACGA AACTGATCTT 
TCTCCGCCGC TCGACAAGGC TGGCATCACT TGTCTTCAAG AAGTTATTGG TACCCTGTTA 
TATTATGCTC GCGCCGTGGA TTCAACCATG CTTGTTGCTC TCGGCACCCT CGCATCCGCT 
CAAACGAAAG GAACCGAAGC AACTGCCGAA GCCGTCACGC AACTACTAAA TTACAGCGCA 
ACGCACCCAG ACGCGACGGT ACGATACCAC GCCAGCGACA TGCACTTACA CGTTCACAGC 
GATGCTTCTT ATTTATCAGA ATCCAAAGCT CGCTCTCGCG CTGGTGGAAT TTTTTTTCTA 
AGTTCTGCAC CTACCAAGAA CCCCAAGCCA AATTCCAAGC CACCGCCATT AAACGGCGCC 
ATACACACGC ACTGTTCTAT CATGAAGTCC GTTCTTTCTT CTGCAACCGA AGCTGAACTG 
GGTGCACTAT TCTTTAACGC CAAGGACGGT GTGGAATTAC GTACTACCTT GGAAGCTATG 
TGACATCCCC AGTTAGCTAC TCCTATTCAA ACTGACAATG AATGTGCATC AGGAATTGTC 
AACAATACAG TGAAACAACG AAGATCTAAA GCCATAGACA TGCGTTTCTA TTGGATTAAA 
GACCGTGTCA AGCAAGGTCA ATTCAATGTT CATTGGAGAA AAGGAACTGA TAATCTTGCA 
GATTATTTCA CCAAGCATCA TTCGCCATCA CATCATCAAA TAATGCGATC TCGTTATTTG 
CTCGATCTCG ACCAAACTGC CTCCAACTCA AGTTTGAAAC GAGGGTGTGT TGATAATTCC 
ATTGGGCCTA CTAAATCTTT CCCATTCCGC TGTGACAAGA CTGATATTCT CCCAATCCGT 
TGTGACAAGA TTGATAGTAC CAAAGAACCT ATCACGGTTA CATACAGAGC TTTAACGTCC 
TACGAACGTT CTAGTCTTCC CGTTTACATT TCAAACAAGT CATCGCCATA TGAAACAGTC 
ATTGGCGATT CAGCTGCATC ATACAGACTC AATCACGATT CTCAAACTAG TCAGAAATCT 
TATTAGTTCA TCGATTTCCA TCATTCGCGT TCTTGCGTTT GTAGAGCTCA TCAATAGTAT 
GGACAGTTCT GGAAAAGGTG ATTGGTGTAG AAGCCCAGCT AGGTTGTCAA CTGGAATGAC 
AGTTTTGAGT ACCGGTTCGC GCGATGGCGC GCACTACTTG GGTCGTGGCA CCCAAGGCGA 
GCCTGTCGAA ACTAATCTTG TGTGTTTGGC CACAAATTCC GACACGGATG GTTTTGGACA 
GGCGCAATCC CAGCTGGGTA TTCAGAAACA TGACGTGACT GTTTCGGGAC TCGATCGTTG 
CCATGCTAAG GAGCATGGTA ACTATGATGA ATGTGCCCAC GGTGCCGTGT ATAACACCGT 
GGAGAATAGT GAAACGGACC ACAATGGCGC TTGGCAGATT GTGGAGCCAA ATGGAAAGTG 
A 

 

Protein sequence

MTTKSTPKDL IDSFPHSKLT PIATATTEPD YLSLHQLQYE INDNAETLSS TLGDGQHGHL 
FLVISETEYL EMTDGIPCIP PVQPPFDPVH AANATAPQIL FDLYHNAIKA FRNQLLEAIP 
IEYIESLGHP TRGFNKVSPL KILSHLWETF GKIQASDLIA NDERMKAAWH PPTPIQQLFQ 
QLEKGNQFII ASGQVMDERI IARIGYQIIE KTGLFDLASR DWHYKDEADK TLANFKKHFQ 
KANKDLALTA TSSSAGYHTA NQSTVIKGKS YCWTHGIVHN TKHTSATCEK QAPGHKTGAT 
LHDKQGGSTK TYQYTPPSSV APNTPPLASS PPFFPPDAIA DTGCTGHFLS TNIAHIHCQP 
TVPGINVVLP DGRTITSSHI TELNIPSLPP AARTAHIFPG LSNGSLISIG QLCDHGCTAT 
FTSDAVSIEL NNTVVLRGGR SPCTRLWTLD SPVTPNPPAT ELHAPLHDKN FANHLGDHSG 
TLADRIAFVH ASLFSPQLST WCKAIDEGRL TTFPDITSAQ VKRHPPQSVP MVKGHLDQQR 
SNLRSTKPKV TLCASVDPDD INFDTNPVVQ DPPAARTQFL YADFAEVTGK IFTDPTGRFV 
TTSSSGNAYM LVVYNYDSNF IHVEAMKNRT GPEILSAYQR AHAMLSSKGL RPQLQRLDNE 
ASTALQQFMS SVNIDFQLAP PHVHRRNAAE RAIRTFKNHF IAGLCSTDKN FPLHLWDRLL 
PQAIMTLNLL RGSRINPNLS SWAQLHGSFD YNHTPLAPPG IRVLVHEKPS IRRTWAPHAA 
DGWYVGPAMN HYRCYRVWVK ETTSERISDT LTWFPSQVKM PSTSSRDTIV AAAHDLAHAL 
AHPSPASPLS PLSVNEREAL SQLSDIFSKA ANPVDSSLPV APTATLSPPA ASTSSPRQVR 
FRNPVTESLP RVPTATAAPP QSLPRVPPPD SEAETYKLVT CNPRQARPPA PVVPSPKVPT 
PPHSHGTRLQ AALYPDAFDS ANAVSLAIQL HHTDSITILK LVRNLISSSI SIIRVLAFVE 
LINSMDSSGK GDWCRSPARL STGMTVLSTG SRDGAHYLGR GTQGEPVETN LVCLATNSDT 
DGFGQAQSQL GIQKHDVTVS GLDRCHAKEH GNYDECAHGA VYNTVENSET DHNGAWQIVE 
PNGK