Gene PHATRDRAFT_37226 details

Gene Information

• Locus tag: PHATRDRAFT_37226
• ID: 7202179
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: -
• Start bp: 446365
• End bp: 449946
• Gene Length: 3582 bp
• Protein Length: 1165 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002181378
• Protein GI: 219122073

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.154451
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCCTC TTGAACATGT TCTTGTGAAC CTTTTGGGAG CGACGACACC GGATTCGTCG 
TACCGTCGGT TCTTTGAAGA GTACAGTATT ACTCAGGCCA GCGAGTTGGC CTCAATCACC 
GAAAATCGTC TTGCAACGGT GTCATATGGT GTTTTGACTC CTTCTGTGGG AGATACCCCT 
GCCATTATTG TTCGTATGTT TCTTCCGTCT GCTCAGCAGG ATCGGATCTT GAAGATTGTC 
AAATGGTTCC TCTCGAAAGG TACCGATGTG ACAAACGAAA CCTGGTTTGA ACTTACCCCT 
GAAGTCCTTG AGTATTGGCA ACCAGCCTCT GCTATTGTTG CCCCTGCTAC CCCTGTTGGA 
TTGGACGCTC GGAGTTCCTT TGTTGAAAGT GCTGCCGCAA AGTTTCGGAA GACAATCAAG 
AATCACTCCG TTCCGTACCC AAAGTTCAGT GAAGACCGTT TTTGGGTCAC TTGGAATACG 
AATATTCGTA TCAAGCTTCG TATCCATGGC GTCCAGTTGG TTCTTGACCC GGATTATTTG 
TCCGAGACTG TCAACGAGAC GGATACATTT GTCGAAATGC AGAACTTTGT TTTTGGCGTG 
TTCAACAATA TATTATTGAC CCCTCGTGCG CGTGGAATCC TCCACAAGCA TGTGGATGAA 
TTGGATGCTC AGGCTGTTTA CCGCGACCTT GTTGCCTCGT ATGGTAAAGG TATCAATGCG 
CAGATCACTG CTACATCCAT TGAAACGAAG CTCACTTTGT ATTCATTTGC AACTTCAAAG 
AGCAAGACCT ATGTTGCTTT TTTGACGACC TGGCGCAATT TGATTTACGA TCTTGAATGG 
ATTAACAAGT TCCCCTTGCC GGATCACCAG AAGAGCGTAC AACGCAAGTC AGCTGTCCGT 
TCCCATCCGC AATTGAAACT TTTCCTTGGA AATGTTCAGC TTTACTCTCG TACCCATGTG 
GGTAAGAGTG CCGACAATTC CGATTTTGAG TATGTTTATG ATTTGATGCT CGAACATGCG 
ACTGATATTG ATCTGACCGA TTTGGAAGAC CGCGGTAACA ACCGCGGTGG CCGCTCAGCA 
AACAATGCGA AGTCTCAGTC TTCTTCCAAG AAGAAAACTA ACAAAACAAT TGGTAAGAAG 
CACAAGAATT ATGTGCCTCC TGAAAAGTGG AATGCTCTCT CTCCCGAAGA GAAGTGGACC 
ATTATGGACC AACGAGGACC TTGCCCTGCT CCAGCTCCTG CCCCTGCCTT ATCAGTGAAC 
GCCGCTGCCA CTCAGCCTCC TCCTACGGTG TATGTCAGCG ACTCGACGGT TGTGGACAAT 
CAAAGCCTCG CTTCGACTCA CGTCCTGCCT GCTGCCGGAC CTGGTCAACT GCTTTGTTCG 
CTCATTTCGA ATTCAGGTTC CTGCCAGCAC CCTGCTCCAT CGAATGGAGC CACGTCTGAC 
TCTTTTTCGG TCAATGGGAC CACCTATTGC GGCAAAGTGA ACCGTGCTTC TGTGCAGTAC 
CGTCTTTCCA CTCACGATGT TTCGTTGAAT AAGGACTCTT TGATCAATGG TGGTGCCAAC 
GGTGGCCTTA GCGGCTCCGA CGTAACCGTT ATTTCGCAAT CCCTGTTGGA GGCAACTGTC 
TCTGGAATTG GAAATTCGGA ATTGACCAAC CTCCGTTTGT CAACGGTGGC TGGACTCATT 
CACACGACGG ATGGTCCCAT TATTGGTGTG TTGCACCAGT ATGCTCATCT TGGTGTTGGT 
AATACCATTC ATTTGTGCAA CCAAATGCGC TCCTGGGGAG TCACAGTTGA CGACGTCCCT 
CGTACTTTTG GTGGCAAACA GCGTATTGTC ACGTCCAATG GTCGTTTTGT CATCCCGCTT 
TCGGTTTCTG GCGGACTCAC TTACTTGTCT ATGCAGGCTC CTGCCGAGGA GGACCTGGAC 
ACTTTCGAAT GGGTGCCTTT TACCGCTGAC AACGAGTGGG ACCCAAATGG TGTCTCTTCT 
CCTGCCGCTG CCGACAATGA CCTCAGTTTG CAGCTTCCTG CCGGCCATGT CCCGTTCCGT 
GATGAACGCA TCAATAACTT TGGTCTCCTT GCGCATTCCG CGGCTGTCAG TTGATCCCCT 
TTGAATGCCG ATGCTTTGCA ACCCAATTTT GGATGGGTTC CCAGTGCTTG TATGTCTCGC 
ACGTTTGAGA ATACCACGCA ATTCGCTCGT GCCCATGCCC GTTTGCCCCT GCGCAAACAC 
TTCAAGTCGC GTTTCCCTGC TGCCAATGTT TCTTGTTTGA ACGAAATTGT GGCAACCAAT 
ACCTTCTTCT CGGATACCCT TGCGGCCGAT GACGGCATTT TTAACCATGG TGGGGCTACG 
ATGGCCCAAC TTTTCGTTGG AAAAAGTTTG CAAATCACCT CTGTCTTCCC GATGAAGCGT 
GAATCCCAGT TTGCCCATAC TTTCGAGGAC TTTATTTGTA CCCATGGTGC TCCCAATGCC 
CTCCTCAGCG ACACTGCTTG TGCTCAGATC GGTAAACAGG CACTTCAGAT TTTGCCTATG 
TATGCAATCG ACGATATGCA GTGCGAGCCG CATCATCAGC ACCAAAATTA CGCGGAGCGC 
CGCATTCAAG AGGTGAGAAA GATGGTGAAC ACAATCATGG ATCATACAAA CACTCCTCCG 
GAATATTGGT TGCTCTGCGT ATCTTATGTG ACCTACTTGC TCAATCGCCT TGCTGTTGAA 
AGCTTGAATT GGCGTACCCC GCTTCAGGTT GCCCATGGAC AGCGTCCTGA TATTTCTGCT 
TTGCTCCTTT TCCGTTGGTT TGAACCCGTT TATTATTACA ATCCTGACCA TGCGTCTTTC 
CCATCGGCTT CTTGCGAGAA AACTGGTCGT TGGATTGGTG TTGCTGAACA CAAAGGTGAT 
TCGCTGACTT ATTGGATTTT AACCGACAAT ACTCACCAAG CCATTGCTTG TTCTGTTGTT 
CGTTCAGCCA ATGTCAATAA TGTTTTGAAA AACCATCGTG CTGCGAATTC CTCTCCCAAT 
GGTGGGGAGC TTTCGAATCC TAAGCCCATT GTCTTGGCTA CGAGTGACCT ACGCCATGAC 
GCTACGGTCG ATCCATCTTT TGAGAAATCC CCTGCATTCT CTCCTGACGA ATTGATTGGC 
AGGTATTTGA TCCGTGAAGC CCCTGACGGC CAGAGCCATC GAGCCCTTGT TGCCCGTAAA 
ATTATTGATA CCGACTCTGA TAACCATCAG GCGATCCGCT TCTTGTTGCA AATTGATGAA 
AAGGATGCTG ACAAGATCAT TTCGTACAAT GAACTTTCCG ATTTGATGGA AGCCCAACAA 
TCAGAGCCCG CTACGAACGG AAATATCGAA GATCATTTCA CGTTTACTAG TATTATTGGA 
CACCAAGGCC CTTTGCAACC GACCGATGCT GGTTACAAGG GATCCTCTTG GAATGTTTTG 
GTTCAATGGG AAGATGGTTC CCAGTCGTAC GAACCTCAAA TTGAAATGGC TAAGGACAAT 
CCAGTCACAC TCGCGATGTA CGCGTCTGAC AACAATCTCC TTAACGTGCC CGGGTGGCGC 
CGCTTCAATC GTTTGCTTCG CAACCGTGAT GACTTTAATT GA 

 

Protein sequence

MDPLEHVLVN LLGATTPDSS YRRFFEEYSI TQASELASIT ENRLATVSYG VLTPSVGDTP 
AIIVRMFLPS AQQDRILKIV KWFLSKGTDV TNETWFELTP EVLEYWQPAS AIVAPATPVG 
LDARSSFVES AAAKFRKTIK NHSVPYPKFS EDRFWVTWNT NIRIKLRIHG VQLVLDPDYL 
SETVNETDTF VEMQNFVFGV FNNILLTPRA RGILHKHVDE LDAQAVYRDL VASYGKGINA 
QITATSIETK LTLYSFATSK SKTYVAFLTT WRNLIYDLEW INKFPLPDHQ KSVQRKSAVR 
SHPQLKLFLG NVQLYSRTHV GKSADNSDFE YVYDLMLEHA TDIDLTDLED RGNNRGGRSA 
NNAKSQSSSK KKTNKTIGKK HKNYVPPEKW NALSPEEKWT IMDQRGPCPA PAPAPALSVN 
AAATQPPPTV YVSDSTVVDN QSLASTHVLP AAGPGQLLCS LISNSGSCQH PAPSNGATSD 
SFSVNGTTYC GKVNRASVQY RLSTHDVSLN KDSLINGGAN GGLSGSDVTV ISQSLLEATV 
SGIGNSELTN LRLSTVAGLI HTTDGPIIGV LHQYAHLGVG NTIHLCNQMR SWGVTVDDVP 
RTFGGKQRIV TSNGRFVIPL SVSGGLTYLS MQAPAEEDLD TFEWVPFTAD NEWDPNGVSS 
PAAADNDLSL QLPAGHVPFR DERINNFGLL AHSAANTTQF ARAHARLPLR KHFKSRFPAA 
NVSCLNEIVA TNTFFSDTLA ADDGIFNHGG ATMAQLFVGK SLQITSVFPM KRESQFAHTF 
EDFICTHGAP NALLSDTACA QIGKQALQIL PMYAIDDMQC EPHHQHQNYA ERRIQEVRKM 
VNTIMDHTNT PPEYWLLCVS YVTYLLNRLA VESLNWRTPL QVAHGQRPDI SALLLFRWFE 
PVYYYNPDHA SFPSASCEKT GRWIGVAEHK GDSLTYWILT DNTHQAIACS VVRSANVNNV 
LKNHRAANSS PNGGELSNPK PIVLATSDLR HDATVDPSFE KSPAFSPDEL IGRYLIREAP 
DGQSHRALVA RKIIDTDSDN HQAIRFLLQI DEKDADKIIS YNELSDLMEA QQSEPATNGN 
IEDHFTFTSI IGHQGPLQPT DAGYKGSSWN VLVQWEDGSQ SYEPQIEMAK DNPVTLAMYA 
SDNNLLNVPG WRRFNRLLRN RDDFN