Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37225 |
Symbol | |
ID | 7202022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 440711 |
End bp | 441460 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181377 |
Protein GI | 219122071 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.289341 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATGGTC ACACACCTGA TATTTCCATG TTTCGATTCC GATTCTGGGA ACCTGTTTGG TACTATGAAC CAACGGCCAA GTACCCAGCT CCTAATTTTC TCCCTGGTTG TTTCATTGGA ATTGCCTGGG ACCATGGCGA CGCTTTTACT TACAAGATTT GGACTACTCC CAATAACAAT TGGAAGCAAG GTCGCGAGCT TGTTCGAAAT GTCGTCCGCT CGCGTCATTT GGAGAAAAAG GAGCCGGTGG TCTCCTACCA AGATGAAGAT CTTCTCTTCA GCAAGACGCA GCCGTCGCGT ACGCAGCGTC CTCGCTCGAA AAAGAGGAAC TCTTGTAGCA ACAACTCCCG TGGAGCCGAA GAGGTAACTT TGGACGGTAG TGAATTGGAG TCACTGGTCC GGTTTGATGA TACTCCTCCT ATCACCAGTG TGGATTCAGA GGAGCAGGGG GGTAACAAAG CGGAAAGCCA AAGCATTCAC TTTTCTCCCG TCGAAGTTGA AACGTCCCAC GGTGACGAGC TGTACGAAGA CAGTGAGTCA AAGGCAACTA ACTCTACTAT CAACTCGAAG AGGGCTCGCA AGGAGGTCGA CAATTCAGCA CTTCAGTCCT TTGACCCGCT GAACAACAAC GCGGAGGTCA AAATGACAAG CAAGATCAAC AACTACCTCG ACACAAACAA GTCCGCGGCT TCAGGAGCTG GCGGAGCCCA TGTCACGAAA ATTGTCGGAC ACAATTGGAT GGACGGTTGA
|
Protein sequence | MYGHTPDISM FRFRFWEPVW YYEPTAKYPA PNFLPGCFIG IAWDHGDAFT YKIWTTPNNN WKQGRELVRN VVRSRHLEKK EPVVSYQDED LLFSKTQPSR TQRPRSKKRN SCSNNSRGAE EVTLDGSELE SLVRFDDTPP ITSVDSEEQG GNKAESQSIH FSPVEVETSH GDELYEDSES KATNSTINSK RARKEVDNSA LQSFDPLNNN AEVKMTSKIN NYLDTNKSAA SGAGGAHVTK IVGHNWMDG
|
| |