Gene PHATRDRAFT_37222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37222 
Symbol 
ID7202019 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp429573 
End bp431177 
Gene Length1605 bp 
Protein Length467 aa 
Translation table 
GC content60% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181207 
Protein GI219121716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000463467 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCCT CCTGTGAGGC TCTCAGATTA CTAGAAATTA CCTTTTTGAT TGTGATCTCC 
CCTTTGTTGA TCTATTCAAC AAGCTGCAGC CAAGGGATCT GATCAATCCC TATCTCAGCT
TGTCAAGCCC CCTGCCACAG CCCACGCTCT TGTTCCCAAC ACCCCCCTCG CCAACTGCAT
CGCTTTTGTT CACGCCTCGC TCTTCTCCCC GGCTCTCTCT ACCTGGTGCC AGGCCCTTGA
CTCCGGCCAT CTTACGACTT TTCCAGACCT TTCCTCCCGC CAGGTCCGCA AGTACCCACC
CAGCTCCCCC GTGATGATCA AAGGTCACCT CGATCAACAA CGAGCGAACC TACGCTCCAC
CAAGCTTTTC CCCGTCGTTC CTCCAACAAC CACGACACCT CCAGCCGATC CTGAGCCCGA
CCTTGATCCT CCCGCAACCC ACCCCATCGC ACGCACACAC CATGTCTTTG TTGCCCACCA
ACGGGTCACC GGTCAGATCT ACACCGACCA ACCGGGCCGC TTTCTCACTC CCTCCAGTGC
CGGCCACAAC AACATGCTCG TCCTTTACGA TTACGACAGC AACGCTATCC ACGTCGAACT
CATGAAGAAC AAGTCCGGCC CCGAGATTCT GGCCGCCTAT CAACGCGCTC ATTCTCTTTT
CACCCAGCGC GGCCTCCGTC CTCAACTCCA ACGTCTCGAC AACAAAGCCT CTGCAGCCCT
CCAAGCCTTC ATGACCTCTA AGCACGTCGA CTTTCAGCTG GTACCCCCCC CCCCCCCCCC
CCCATCTACA CCGTCGTAAT GCAGCCGAAC GAGCCATCCG GACCTTCAAG AACCACTTTA
TTGCTGGCCT TTGCACCACA AACCCGGATT TTCCACTGCA TCTCTGGGAC CGCCTTCTCC
CCCAGGCCCT TATCACCCTC AATCTCCTTC GTCGGTCCCG CATCAATCCC AAGCTGTCCG
CCCACGCCCA GCTTCATGGT GCTTTCGACT ACAACCGCAC CCCGCTTGCT CCTCCCGGTA
CTCGCGTCCT AGTCCACGTC AAGCCGTCCG TCCGCGAAAT GTGGGCCCCC CATGCTGTCG
AAGGTTGGTA CCTTGGCCCC GCCCTGAACC ATTACCGTTG CCACCGCGTC TGGATCACCG
AAACACGTGC CGAACGTGTT GCTGACACCC TTTCCTGCTT CCCGACCCGC ATTCCCATGC
CCGCCGCTTC GTCCACCGAC CGCGCCCTGG CCGCCGCCCG TGACCTAGTC CATGCCCTCC
AGAATCCTTC CCCTGCGTCT CCGTTCGCCC CCCTTGATGC CACCCAGTAC CAGGCCCTCA
CCGACCTTGC CAATCTCTTT GCCACCGTAA CCGCCCCGGC CGATGACGTC CTTGCACCCG
CTCCATTGCC TCCGGTCCGT CCTCCTGCCC CAGCAACTCC CCTTGCTCAA GTCCGTTTTG
CCGTTCCTCT TGTCACGGCC GAACATGCCC CCGCACTACC GAGGGTGCCC ATTCCGGCCA
CAGCACTTCC GAGGGTGCCC ACCACGGCCA CCTATCACTC TCGCACCGGC AACCCCGGCC
GTCGCCGCCG CAAAGAGCGC ACCCAACCGA CAACCCCAAC CCTAG
 
Protein sequence
MSASSAAKGS DQSLSQLVKP PATAHALVPN TPLANCIAFV HASLFSPALS TWCQALDSGH 
LTTFPDLSSR QVRKYPPSSP VMIKGHLDQQ RANLRSTKLF PVVPPTTTTP PADPEPDLDP
PATHPIARTH HVFVAHQRVT GQIYTDQPGR FLTPSSAGHN NMLVLYDYDS NAIHVELMKN
KSGPEILAAY QRAHSLFTQR GLRPQLQPER AIRTFKNHFI AGLCTTNPDF PLHLWDRLLP
QALITLNLLR RSRINPKLSA HAQLHGAFDY NRTPLAPPGT RVLVHVKPSV REMWAPHAVE
GWYLGPALNH YRCHRVWITE TRAERVADTL SCFPTRIPMP AASSTDRALA AARDLVHALQ
NPSPASPFAP LDATQYQALT DLANLFATVT APADDVLAPA PLPPVRPPAP ATPLAQVRFA
VPLVTAEHAP ALPRHFRGCP PRPPITLAPA TPAVAAAKSA PNRQPQP