Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37181 |
Symbol | |
ID | 7202159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 338016 |
End bp | 338738 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181358 |
Protein GI | 219122031 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.705611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAAAG GCAGCAAAAA TGCCTTATCA GCGTCTGATC AGGGTTGTTC GATGGACGAT TGGATAACAA AGTTGGCGAA ACAGACGACT GGGGCGAGTA CTACAACGGC CAGCACAAGC AATACCAATC GATCCAAAGC GGAGCGCATT CAGCAACGCC TGGCTAAGAA ACAACGCCGC GAGGACCGCA AAGCTATTGC ACTGAATTTG AGAGAATCCA CACGGTTCAG ACCCGACCAA TCGCGTGATC GAAAACGTTA CCGCGACGAG TTGAAAGAGA CAGAAGCTCC ATCCGCTAAG AAGCTTACGA ATCAATTGGC ATCGGCCATT CAAAGGCTTG TCCAGGCAGC AAAAGCGTCC GATACCAAAC GACCACGTCC ATATACCACA AAAGAATCCA TCAAGTACAA GAGACAAAAA TGGGATGAAA CACACATTCA GCCGCGGCCG AGAGACTATG GCGGTATAGG ACTGGCTAGG CCCAGCCTTT TTCTTTCGTT TACTGATCCA GCATTCCCGC CAAAATTGGA AGAAGAGTTT GCAGAACACA TTCCAGGATT TTTCGGAAAG ACGAGAACAA AGGCGATGAA AAAGCAGCTC GACAAGAATA TGCTCTGGAA GCAGTTAGCT GAGAAAAAGA ACCGTAAAAT CAACGGGAAG AAACTGTCGT CGATGACACC GGACGAGCGA GTAGAGGAAA TGATCAAAAT GGGCATGATA TAA
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Protein sequence | MGKGSKNALS ASDQGCSMDD WITKLAKQTT GASTTTASTS NTNRSKAERI QQRLAKKQRR EDRKAIALNL RESTRFRPDQ SRDRKRYRDE LKETEAPSAK KLTNQLASAI QRLVQAAKAS DTKRPRPYTT KESIKYKRQK WDETHIQPRP RDYGGIGLAR PSLFLSFTDP AFPPKLEEEF AEHIPGFFGK TRTKAMKKQL DKNMLWKQLA EKKNRKINGK KLSSMTPDER VEEMIKMGMI
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