Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37064 |
Symbol | |
ID | 7202088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 90743 |
End bp | 91288 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181296 |
Protein GI | 219121902 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.166453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGGTC CGGAATGGAC TTATGTTGCG CCTTTCGAGA AGAAATGCAA TGGTTGCGGT GTGGTCAAGG CTTTAAACAG CCATTGTGAG GGAGATGCGG TGATGCTCGA GATGAAGGCG GCTGCTTTTG GTGTAACCAC CCACACTGGC GAGCGCCGCA ATTATGGTAT AGCAAAGTAC ACAAACACAC TGTCAATGGC GTTCCAGACT CTCAACAAGT ATAGAGAGAC CCTGGCAGAG TCAAGGAAAG TGGATGTCTT TCTCCGCAGC AATCACTGCA TGGATCCCGA GATGCTTTTG GGAATTGCGG TAAATCAAGG CAATGCTGAC CGCATGTCCA AATTTGTGTT GGACAAGGAA AAGGATGAGG TCCAAGCAAA GCGCGCGGCC GCCAAGGCCT CTTGTAACAA GAACAAGCAC TTGGCAGTGG CAGTTATTTG TTCAAGCGAG AAACCTGACA AGGGGGGCAA GGATGATGTC ACAATATACA CCAAGGCAAC ATGTCCCTGG GACAAGAGAC ATCTAGCACT GTCCATGGAA ATGTGA
|
Protein sequence | MNGPEWTYVA PFEKKCNGCG VVKALNSHCE GDAVMLEMKA AAFGVTTHTG ERRNYGIAKY TNTLSMAFQT LNKYRETLAE SRKVDVFLRS NHCMDPEMLL GIAVNQGNAD RMSKFVLDKE KDEVQAKRAA AKASCNKNKH LAVAVICSSE KPDKGGKDDV TIYTKATCPW DKRHLALSME M
|
| |