| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_28577 |
|---|
| Symbol | |
|---|
| ID | 7202201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011680 |
|---|
| Strand | - |
|---|
| Start bp | 850282 |
|---|
| End bp | 851434 |
|---|
| Gene Length | 1153 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181454 |
|---|
| Protein GI | 219122232 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTCCCAAGCT ATTAACCGGA ACATGGCGTC CGACACCGCC ATTCCGCCAC AAGAGCTCCA
CACCGTCAGC CCTAATGTAG TGCTGCTCGA AAACGAACCG CCCTTTTACG ATGCGCTTCA
TGTGAACTAC GTGTCGGGTT TGGCCGCCAA ACTCGACACT CCGTCTTCGT ACGAAGGCGC
CCTCACCGCT CATCTGCGCA TGTCTGGTGT GTACTGGTCT TTGACCGCGC TTTCTCTCTT
GCTACCATCG GATCAAGAGG TTGATCGACT CATGGGTGTA CACGTTGTGG TGAACAACAC
GCGTCAAGCG ATAGTCGACT GGGTACTGGA CGATTGCTAC GATGCTCCAG CTGGTGGATT
CGGGGGAAAC GCTTCCCAAG ACGCTCACAT CCTGTATACC TTGTCCGCCT TGCAAATTCT
TGCACTGGCG GATCGACTCG ACGATCCACG GTTGCAGCGC GACGCCATTG TGAAATTTGT
CGTCGGCTTG CAGCAACCGG ACGGATCGTT CGTCGGAGAC TGCATCACCG TTGGTAGCCA
CAACGACAGC GAATCCTGCG GTGAGATCGA CACCCGCTTT ACTTACTGCG CACTTTCGTG
TCTTTCCATC CTTGGCTGTC TCGAAAAGCT GGACGTATCT GCCGCTGCCC GATACATTCT
GCAGTGTCGG AATTTGGACG GTGGTTTCGG ATCCGTGATT GGGGCCGAGT CCCACGCCGG
ACAAGTCTTT TGTTGCGTCG GGGCGTTGGC CATTGCCCAG TCGCTGCATT TGCTTGGTAC
AGACGGCATC GACCTATTAG GTTGGTGGTT GTCCGAGCGG CAAGTCGATT CGGGAGGTTT
AAACGGGAGA CCCGAAAAAC AAGCCGATGT CTGTTACTCT TGGTGGATCC TCTCGGCGCT
CTCGATATTG GGGAAAATGG AGTGGATCAA CGGAGACAAG CTAGCGGGCT TTATTCTACG
TTGCCAAGAC GACGAGGACG GAGGTATCGC GGATCGACCG GACGATATGG CTGATGTCTT
TCATACTTTC TTCGGGATTG CCGGACTTAG CCTGCTGGGT CACTTGCACG ACAACACGGA
AAACAAGCCC TATCGGTACA TTGACCCGGT TTACGCTTTG CCCACTGATA TTGTCCGTCG
ACTGGGCCTC ACC
|
|---|
| Protein sequence | MASDTAIPPQ ELHTVSPNVV LLENEPPFYD ALHVNYVSGL AAKLDTPSSY EGALTAHLRM
SGVYWSLTAL SLLLPSDQEV DRLMGVHVVV NNTRQAIVDW VLDDCYDAPA GGFGGNASQD
AHILYTLSAL QILALADRLD DPRLQRDAIV KFVVGLQQPD GSFVGDCITV GSHNDSESCG
EIDTRFTYCA LSCLSILGCL EKLDVSAAAR YILQCRNLDG GFGSVIGAES HAGQVFCCVG
ALAIAQSLHL LGTDGIDLLG WWLSERQVDS GGLNGRPEKQ ADVCYSWWIL SALSILGKME
WINGDKLAGF ILRCQDDEDG GIADRPDDMA DVFHTFFGIA GLSLLGHLHD NTENKPYRYI
DPVYALPTDI VRRLGLT
|
|---|
| |