Gene PHATRDRAFT_28562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_28562 
Symbol 
ID7201973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp808903 
End bp809865 
Gene Length963 bp 
Protein Length166 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181265 
Protein GI219121838 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.993621 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACTCATCGT GTGATCGATT CGTTCGCTGT TCCGGTTGTT GCGTATCCTA TCTATTCATT 
CCCCCAACCC AACCTGTGAG TGTCCAGTAG TGCACAGTGT GTAGTGTATA GTGCTATCAT
CCTCGTTGTT GTTTTTGTTG ATTGGCGGCA CGCCAAGCAG GAATGCTGCC GAGGCGGACA
ACTTACAGAG AGTGTCGAGG ACTACCGAGT CCAATGCACA GGCGCAGCAT CATCCTCTTG
CCAACCAGGA ACAACACTTG TAGAGGCTGC GGCATACGGT GGTACTCGGA TCTACGGATC
GATCCTTATT ACTACCAACC GACATGCTGC TGGTAGATAC TCGATTAACA ACTGTCTTGA
CTCACACCAT TGTTCCCTAA TTGTTGCTTT TTGTTGTTTT CATTGTTGTC CACTGACAAA
CCATCGCAGT TCTGCAACAA TCATGGCTCG CGTTCCCAAG GAATACGTAG AGTGCGATCA
GAACGAAAAG GCTTACCAAA AGCAGGATGC CATTTTCATC GCCCGCAAAC GCGCCATGGG
CAATCAGCAA CGCCAAAAAC CCATGCGCTT CGTCAAGTCG GTCGGACTCG GCATCAAGAC
ACCCGCCGCC GCCATTGAAG CGAGCTTTGT CGACAAAAAG TGCCCCTTCA CCGGAAACGT
TTCCATTCGC GGACGCATCC TCAAGGGTCT CGTCATTTCC ACCAAAATGA AGCGCACCAT
CATTGTCCGA CGGGACTACT TGCACTACAT TACCAAGTAC CGTCGTTTCG AAAAGCGTCA
CACCAACATT GCGGTCCACT GCTCTCCGGC ATTCCCGGTC AAAGATGGTG ATATTGTCAC
CATTGGACAG TGCCGCCCCT TGAGTAAAAC GGTCCGCTTC AACGTGGTCG CACTCGAACC
CCAGCGTGTC ATTCAGGGAA AGAAATCCTT CCGCGTCTTT TAAACAAAAC ACACCATACC
CCA
 
Protein sequence
MARVPKEYVE CDQNEKAYQK QDAIFIARKR AMGNQQRQKP MRFVKSVGLG IKTPAAAIEA 
SFVDKKCPFT GNVSIRGRIL KGLVISTKMK RTIIVRRDYL HYITKYRRFE KRHTNIAVHC
SPAFPVKDGD IVTIGQCRPL SKTVRFNVVA LEPQRVIQGK KSFRVF