Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_28562 |
Symbol | |
ID | 7201973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 808903 |
End bp | 809865 |
Gene Length | 963 bp |
Protein Length | 166 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181265 |
Protein GI | 219121838 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.993621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CACTCATCGT GTGATCGATT CGTTCGCTGT TCCGGTTGTT GCGTATCCTA TCTATTCATT CCCCCAACCC AACCTGTGAG TGTCCAGTAG TGCACAGTGT GTAGTGTATA GTGCTATCAT CCTCGTTGTT GTTTTTGTTG ATTGGCGGCA CGCCAAGCAG GAATGCTGCC GAGGCGGACA ACTTACAGAG AGTGTCGAGG ACTACCGAGT CCAATGCACA GGCGCAGCAT CATCCTCTTG CCAACCAGGA ACAACACTTG TAGAGGCTGC GGCATACGGT GGTACTCGGA TCTACGGATC GATCCTTATT ACTACCAACC GACATGCTGC TGGTAGATAC TCGATTAACA ACTGTCTTGA CTCACACCAT TGTTCCCTAA TTGTTGCTTT TTGTTGTTTT CATTGTTGTC CACTGACAAA CCATCGCAGT TCTGCAACAA TCATGGCTCG CGTTCCCAAG GAATACGTAG AGTGCGATCA GAACGAAAAG GCTTACCAAA AGCAGGATGC CATTTTCATC GCCCGCAAAC GCGCCATGGG CAATCAGCAA CGCCAAAAAC CCATGCGCTT CGTCAAGTCG GTCGGACTCG GCATCAAGAC ACCCGCCGCC GCCATTGAAG CGAGCTTTGT CGACAAAAAG TGCCCCTTCA CCGGAAACGT TTCCATTCGC GGACGCATCC TCAAGGGTCT CGTCATTTCC ACCAAAATGA AGCGCACCAT CATTGTCCGA CGGGACTACT TGCACTACAT TACCAAGTAC CGTCGTTTCG AAAAGCGTCA CACCAACATT GCGGTCCACT GCTCTCCGGC ATTCCCGGTC AAAGATGGTG ATATTGTCAC CATTGGACAG TGCCGCCCCT TGAGTAAAAC GGTCCGCTTC AACGTGGTCG CACTCGAACC CCAGCGTGTC ATTCAGGGAA AGAAATCCTT CCGCGTCTTT TAAACAAAAC ACACCATACC CCA
|
Protein sequence | MARVPKEYVE CDQNEKAYQK QDAIFIARKR AMGNQQRQKP MRFVKSVGLG IKTPAAAIEA SFVDKKCPFT GNVSIRGRIL KGLVISTKMK RTIIVRRDYL HYITKYRRFE KRHTNIAVHC SPAFPVKDGD IVTIGQCRPL SKTVRFNVVA LEPQRVIQGK KSFRVF
|
| |