Gene PHATRDRAFT_28433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_28433 
Symbol 
ID7202139 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp252999 
End bp253863 
Gene Length865 bp 
Protein Length167 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181167 
Protein GI219121633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0449821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGCTAGGTGC ACATCACTGC TGTCTTGAGT ATCGGGGGAG ATCAAACTGG ATTGATATGA 
GCGACTACGG AACAGAATTG CTTCGAAGGC AGCTTAATGG TGCGTGGTAA AGTAAGAGAA
AAGCCAGCCC TGTGTTGTTT GTGTCACCAA ACGCCGAGGA AACCGGAAAT AGTTCGAGTG
GGTGGATTTT ATCATGAAAT AGCCTCTGTC CAATGGTGTA TGCTGTTTTT GTAAAGTTTT
TTATTTCACG ATTGTAAAGT TTTCTGATTC CACGATTGTT TCTCTCTCCG ATTTCAGACC
TTGCAAAGAA CCCAATTGAT TTGGTTTCGG TAGGTTTGGT AGATGATAGC AATCTGTATG
ACTGGGAAAT TCTTGTAATG GGGCCAGATG GTACGCTATT CGAAGGAGGC TTTTTTAAAG
CGCGTCTGGT ATTTCCGCAC GATTTCCCCA ACATGCCACC AACTATGACG TTTACCTCCG
AAATGTGGCA TCCGAATGTT TACGAGGACG GGAAAGTTTG CATCTCCATT CTGCATCCAC
CTGGAGAAGA TGCTTTCAAC TCGCAGGAGA CTGCCGAAGA GCGTTGGCGA CCGATTCTCG
GCGTAGAGCA GATTTTGGTA TCGGTCATTT CGATGCTGTC CGATCCCAAT GATGAGAGCC
CCGCCAACCT CGACGCGGCA GTTATGTGGC GGAACGATAA ACCGGCCTTC AAGAAGAAGG
TGCGGCAAAT TGTTCGCAAA AGTCAAGAAG ATTGTTGATA TGACTGAAGA AAACCTGACA
ATGGTTCATG CAAGAAGACA GATAGGTACT TGTTAGAGTA TGAATTGTTA GGTATGTTCA
CTTATTAGTA GACAATTAAG AACTC
 
Protein sequence
MSDYGTELLR RQLNDLAKNP IDLVSVGLVD DSNLYDWEIL VMGPDGTLFE GGFFKARLVF 
PHDFPNMPPT MTFTSEMWHP NVYEDGKVCI SILHPPGEDA FNSQETAEER WRPILGVEQI
LVSVISMLSD PNDESPANLD AAVMWRNDKP AFKKKVRQIV RKSQEDC