Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_28433 |
Symbol | |
ID | 7202139 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 252999 |
End bp | 253863 |
Gene Length | 865 bp |
Protein Length | 167 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181167 |
Protein GI | 219121633 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0449821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGCTAGGTGC ACATCACTGC TGTCTTGAGT ATCGGGGGAG ATCAAACTGG ATTGATATGA GCGACTACGG AACAGAATTG CTTCGAAGGC AGCTTAATGG TGCGTGGTAA AGTAAGAGAA AAGCCAGCCC TGTGTTGTTT GTGTCACCAA ACGCCGAGGA AACCGGAAAT AGTTCGAGTG GGTGGATTTT ATCATGAAAT AGCCTCTGTC CAATGGTGTA TGCTGTTTTT GTAAAGTTTT TTATTTCACG ATTGTAAAGT TTTCTGATTC CACGATTGTT TCTCTCTCCG ATTTCAGACC TTGCAAAGAA CCCAATTGAT TTGGTTTCGG TAGGTTTGGT AGATGATAGC AATCTGTATG ACTGGGAAAT TCTTGTAATG GGGCCAGATG GTACGCTATT CGAAGGAGGC TTTTTTAAAG CGCGTCTGGT ATTTCCGCAC GATTTCCCCA ACATGCCACC AACTATGACG TTTACCTCCG AAATGTGGCA TCCGAATGTT TACGAGGACG GGAAAGTTTG CATCTCCATT CTGCATCCAC CTGGAGAAGA TGCTTTCAAC TCGCAGGAGA CTGCCGAAGA GCGTTGGCGA CCGATTCTCG GCGTAGAGCA GATTTTGGTA TCGGTCATTT CGATGCTGTC CGATCCCAAT GATGAGAGCC CCGCCAACCT CGACGCGGCA GTTATGTGGC GGAACGATAA ACCGGCCTTC AAGAAGAAGG TGCGGCAAAT TGTTCGCAAA AGTCAAGAAG ATTGTTGATA TGACTGAAGA AAACCTGACA ATGGTTCATG CAAGAAGACA GATAGGTACT TGTTAGAGTA TGAATTGTTA GGTATGTTCA CTTATTAGTA GACAATTAAG AACTC
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Protein sequence | MSDYGTELLR RQLNDLAKNP IDLVSVGLVD DSNLYDWEIL VMGPDGTLFE GGFFKARLVF PHDFPNMPPT MTFTSEMWHP NVYEDGKVCI SILHPPGEDA FNSQETAEER WRPILGVEQI LVSVISMLSD PNDESPANLD AAVMWRNDKP AFKKKVRQIV RKSQEDC
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