Gene PHATRDRAFT_28431 details

Gene Information

• Locus tag: PHATRDRAFT_28431
• ID: 7202138
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 246981
• End bp: 249203
• Gene Length: 2223 bp
• Protein Length: 634 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002181165
• Protein GI: 219121629

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.120876
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCAACCTTCA CAATCTTTTG TGGTTGTGGC ACAGAGTAAA TGTACGTGAA CACCATCTTC 
TTCCGCTAGA GCCAAGCGAA GTATACCATC ACTATGGTGA AGATCATTGA AAAGATTCGT 
GATAGACGTG CTAAACTGCG ATATCGAAGC AACGATTCAC GGCAGCCCTC TCTGCACGAC 
TGTCAACTGA ACTTTCCGGG CGGAAACTGG TACTATTCGT TCGAGTTTTT TCCCCCAAAA 
ACGGAGGCTG GTCTTGATAA CCTTCTTACA AGAATTGATC GCATGGCTCA GCGGCTGGAT 
CCTCTCTTTA TTGATGTCAC GTGGGGATCC GATAAGACAT CTGCACGGAC CATGGCTTTA 
GCCAGCCATG CGCAAAAATA TCTGGGCGTG GACGTCCTTC TCCATTTGTC TTGTCAGGGT 
ATGACACGTG ATCAGCTCAT CCGTGTTTTG GATCAAGCCA AAGTCTTAGG CATTCACAAT 
ATATTGGCGT TACGTGGAGA TCCACCCAAA GCAAAGAAGC ACTGGCAAGT GGGAGATGTA 
AGTGGTGGAG AGTGCGAGCG GGCAATCGAT TTGGTTCGAC TCATCCGGAA CACATATGGA 
GATTACTTTG GAATTGCCGT TGCGGGCCAC CCAGAGGGAC ATCCTTCTTC AACAAGTCCG 
GAAGACGAGC TTGATCATCT CAAAGAAAAG ATGCGGGCTG GTGCAGATTT TATTATTTCA 
CAGTTTGTCT ACGATACCGA ACGCTTCCTA GACTTTTGCT ATCGCTGTCG TGACGTCGGA 
ATCCAGTGTC CCATTTTACC CGGCATCATG CCGATACAAA GCTATTCCAG TTTTACTCGG 
ATGACTCAAT ATTGTGGTGT TAGCGTTCCC GACGAGATCT GGAAGCGATT GGAACCAATC 
AAAGACGATG ACGAAGCAGT CAAAGAAATC GGTTGTTCGC TCGCCGCAGA GATGTGCCGG 
CAAATTTTGG CGGATCCTAT AGCTAAGATC GACGGAGTAC ATTTTTACAC TTTGAACTTA 
GAACGGAGTG CAACGAGAAT ACTGATGCAA CTTGGTGCTG TCGAGGTCAT CGTCCAGCAA 
GAGAACATTG AGGAAGATCA TACTTTATCC CAAGACGGTA CGGTCAATTC TGGGTTGGTC 
GACAAAATTC GAACAAAATC GGGAAGGATA CTACCTTGGC GTCCGTCTGC AATGACGGGA 
CGATCTAAGA TGGAACAGGT GAGACCTATC AACTGGGCGA ATCGACCCAA GAGCTATGTG 
CTGCGCACAG AGGACTGGGA CGAGTTTCCG AATGGCCGTT GGGGTGATTC AACTTCCCCA 
GCTTTCGGGG AACTCTCGAA TTTTAGTCAC TACTATTCAT TTTCATTAGG CAGTGAAGAT 
GATCAGCGTA ACATGCTGGG AAGCAATCCG ACAAAGTCAG AAGATGTATA CGAAGTTTTC 
GCCTTATACA TTGAAGGCAA GATACCACAT ATACCATGGT GTGAAGCAAC GCTTCAACCT 
GAATCTTTTC TCATTCAGAC CAAGCTCGCT GCACTAAACC GGGCCGGCTT TCTAACCATC 
AACAGCCAAC CTTCTGTAAA TGCGGCACTA AGTACGCATG AATCGTTTGG TTGGGGAGGT 
CCGGGGGGTT ACATATACCA AAAGGCCTAT TGCGAATGCT TTTGTAGTCC CGAGAACATG 
CGTTGCTTAG TTAACATGGT CAAACAAAAT CAATCAATGA ATGTTTACGC GGTCAACAAT 
GCTGGGAATT GTATTCAAGA GGGAACAGAG CTTGGAGGCG TGACGGCGCT GACGTGGGGT 
GTTTTTCCGA ATCGAGAGAT CCTTCAGCCG ACGATCTTTG ATCCCAGAAT ATTTCTTGTT 
TGGGCAGAAG AAGCATTTTC TCTTTGGACG AGCATGTGGT CCAATCTATA TGATTACGAT 
AGCGATAGCT TTGATTTGAT CGAAACTATT CGTGACACGT ACTATCTTTG TGCGATCATT 
GACAACGACT ATATTTCGGA AAGCAATCGA CCGTCTCTCT GGGAAGGTAT TTTAAACGCA 
TCCCAGTGGC AATTGTAGTT TTGCAAGCCG CATTTGGAGC AAGATGTGAC AGCAGGAATA 
ACCTTATTCC AGCGTAAATG GAAGTTGCTA TCAAAATCTC ATATGAGTGG GACCTGGTAA 
CACAAAGTGG CGCGGATTGC AATACCTGAA AACGGTAACC CTATTTAAAT TGATATTTGA 
TGC 

 

Protein sequence

MVKIIEKIRD RRAKLRYRSN DSRQPSLHDC QLNFPGGNWY YSFEFFPPKT EAGLDNLLTR 
IDRMAQRLDP LFIDVTWGSD KTSARTMALA SHAQKYLGVD VLLHLSCQGM TRDQLIRVLD 
QAKVLGIHNI LALRGDPPKA KKHWQVGDVS GGECERAIDL VRLIRNTYGD YFGIAVAGHP 
EGHPSSTSPE DELDHLKEKM RAGADFIISQ FVYDTERFLD FCYRCRDVGI QCPILPGIMP 
IQSYSSFTRM TQYCGVSVPD EIWKRLEPIK DDDEAVKEIG CSLAAEMCRQ ILADPIAKID 
GVHFYTLNLE RSATRILMQL DGTVNSGLVD KIRTKSGRIL PWRPSAMTGR SKMEQVRPIN 
WANRPKSYVL RTEDWDEFPN GRWGDSTSPA FGELSNFSHY YSFSLGSEDD QRNMLGSNPT 
KSEDVYEVFA LYIEGKIPHI PWCEATLQPE SFLIQTKLAA LNRAGFLTIN SQPSVNAALS 
THESFGWGGP GGYIYQKAYC ECFCSPENMR CLVNMVKQNQ SMNVYAVNNA GNCIQEGTEL 
GGVTALTWGV FPNREILQPT IFDPRIFLVW AEEAFSLWTS MWSNLYDYDS DSFDLIETIR 
DTYYLCAIID NDYISESNRP SLWEGILNAS QWQL