Gene PHATRDRAFT_21456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21456 
Symbol 
ID7201992 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp894303 
End bp894997 
Gene Length695 bp 
Protein Length141 aa 
Translation table 
GC content42% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181282 
Protein GI219121873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00440745 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAGCCTCATT TGCGTTTTGA AAGAAGTGGT ATCCATGCTT GGGGAGTATT TGCTGACAAA 
GAAATCGCGT CGGGTGAAAT GGTAATTGAA TATCGCGGTG AACTCATTGG AAATGCGGTT
GCAGAAAAGC GAGATAAACA GTATGATGCA TCAAAGATCG GAAGTGACTA TATGTTTCGG
ATTGATGGAT CAGGTGTTTG CGATGCCACG AAGCAGGGCA ATGTAGCACG CTTTGTCAAT
GCAAGCTGCA ACCCAAATTG CTACACTAAG ATCATCACAC TTGACGGTAT CAAAAGGATA
GTGATATACG CGAAGCGAGA CATTCTCCCT GGAGAAGAGC TTTCTTATGA TTACAAATTT
CCGTTGGAAC GTATTGAGGC AAAGCGAGTT TCATGTTACT GTGGTGCAAA GGATTGCAGG
GGATACATGA ATTGGGTATG TGCTCAACAA ATTGTTTGCT TGTGTTTCTG TCATGAAAAA
GCTTACATCG TTGTCTTGAT AGGATAGAAG CTATGTGTCT TTGTCTTGTC CAGCAGATCT
GCCGGATTCT AAGGAGATTC CAGAAAGGTA GAAATGAAGA AATTTCATAT TCGGCTTTCG
TTCAGGCCAC AATTCCCCTA TTTGGGACAA AACAATGATC AGTGAATAGT GGCAGATATC
ATAAGAGGAA CTAATAAATC CCGTATTTAC ATGTT
 
Protein sequence
MVIEYRGELI GNAVAEKRDK QYDASKIGSD YMFRIDGSGV CDATKQGNVA RFVNASCNPN 
CYTKIITLDG IKRIVIYAKR DILPGEELSY DYKFPLERIE AKRVSCYCGA KDCRGYMNWD
RSYVSLSCPA DLPDSKEIPE R