| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_21350 |
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| Symbol | |
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| ID | 7202164 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011680 |
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| Strand | - |
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| Start bp | 363706 |
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| End bp | 366096 |
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| Gene Length | 2391 bp |
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| Protein Length | 557 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181363 |
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| Protein GI | 219122041 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00403963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGCGGTAGGT ACCACTTTTT GGGCTGTTCA CTGGCGGGGT CAGTTTCTAG CTTATAGGCC
TTTTCATCGA ACCGTCCCTC CGTCACAGTC AGTGTTTTGC CCTCGATTAA CCTGTAAGCA
ATAACGCATA ATGGCTTCGG TAGTATGGAG GAGGCCTTGC ACAAGGCTGC TGTCAACAGT
ACAATACACA CTATCCGCCA GCAGGGTTTA TAGAAGAAGC GCAGTTTACC TTTCGGTCTC
GACAATTCAG CTGTCTGTGA GATCTTTTTC GGACAAACAC GATTTGGAAA GTCCTAAAAA
GCGTTTACAC TACGAGATTC CTCAGCGAGT CCGACAGAAA GTGGTCAGTG CCTCGGATGC
GGTGGCCCTT GTTCGAGATG GCGATACAGT TTCCTGCTCC GGATTCGTAG CGCAAGGTAC
GTCGGACCAA GGCAATCCAT TGCGTTTTTG TTCGGTTTGT TTGTACCAAT ATCCGAGCTC
GCATGTCTCA CAATATTGTT CGTATTTCGA CTCTAGGCGT TGCGGAAGCT GTCTTGAAAG
CTTTGGGTGA ACGGTACGAC CGTACTGGCC ATCCCAACAA CTTGACGCTG CTCTTTGGCG
GAGGTCCCGG AGACTGGGAC AGCCGCGGGC TGAACCATCT CGGAAAGTAC TCCGAAGACA
GCAGCAAGCC ACACATGCTG CGACGCACCA TCGGATCCCA CTATGGGCAA ACGCCCAAGG
TAGCCCACAT GGCTCTCCAA AACATGGTGG AAGCCTGGAC TCTCCCATTG GGCTCGGTGT
CTCGTATGAT ACGGGCTCAG GCGACGCACT CACCAGGCCA TATCACTGAA GTGGGCATTG
GTACTTACAT TGACCCAGAT ATTTCAGGTG GGGCTACCAA CGAGACTGCT TTGGAGAGTC
CGTTGCACAG CAAACTGGTG CAAAAGCTGG ACATAGATGG CCGTCCGAAT CTGATGTACA
AGGCCCTACC GATCCACGTA GCCATCATTC GTGGAACGAC GGGAGACTGC CGCGGCAATA
TATCGATAGA GGAGGAGTCT GTGATCTGCG ACCAGAAGAT CCTGGCGGCC GCCGCGAAGA
ACTCGGGAGG CATTGTGATT GCTCAAGTGA AGCGGTTGGC CGCGGACGGC ACCATTCCTT
GCCGAAGTGT CGCAATCCCT GGGCCGTTAG TTGACGCTGT AGTGGTCGTG GACGAGAAGG
ACCACGACAG TCTGCATCCA ATGAGCTATG TGGAGCGTAA CAATCCATCG CTGACTGGTC
AAATCAAGAC GCCCCAGGAC GAAGTCCAGA AGATGCCGTT GGATGTTCGA AAGTTGATTG
CTCGTCGGGC GTTCTTCAAG TTGAGTCCCG ACCAGATTGT GAACCTTGGA ATAGGTTTGC
CAGAGGGCAT TGCAAGTGTG GCTGCCGAGG AGGACATGCT CCAGTATATA ACACTGTCAA
CGGAGGTGGG CGTCTTTGGC GGTCTGCCGG CTTCTGGGCA TAACTTCGGT CCAGCGTACA
ATGCTACGGC GATGGTGGAA ATGAACCAGA TGTTCGACTT TTACGATGGA GGCGGGTTGG
TAAGTAGGAT ATGGATGGGT ATGCGGATTA ATCTGTGTTC GTTGTTGCTT GTTGAATGTT
GAATGTATTT GTGTCGGCCC TGAACTAACT CTCGGGAACT GCTGGTTGCG GTATACTGCG
TGTGACTTTT CGCCGTCCGG TGTTGCAACA GGACATTTGC TTTCTGGGTG CTGCTCAGAT
CGGAAAGAAC GGAGATGTGA ATGTGTCTCG TATGTCGAAA GACCGACTGA CGGGTCCCGG
GGGCTTTATC GACATTACGC AGTCTACGCG GCGTATTGGT TTTGTGATGG CATTTACTGC
GAAAGGGCTG GAGGTGGACA TTCCTGGAGA CGGGAAGCTG GGAATCAAGC AAGAGGGTAG
AGTGAAGAAG CTTGTTTCTA GTGTGTTTGA GAAGACGTTT AGTGGAGACG AAGCGGTACG
ACGGGGTCAA GAAGTCACCT ATATTACCGA GCGAGCTGTT TTCCGTCGAA CTGGGAAGTT
TGATGTGCAA AATTGAGTTG ATGGAGTTGC CCCTGGTATT GATTTGCAGA AGGATATATT
GGACCAGATG GAATTCATAC CAGCAATCAG TCCCAAACTA GCTGAAATGG ATCCACGTAT
CTTCAAAGAA GGCAAGATGA ATGTAGCGAC GGATTTGTTT GGCTCATTCG ACAACAGATT
TCGATACCAA GAGGATGATC ACATCATGTA TCTTGATCTG TTTGGAATCA CTTTAAATAC
CGAAGGAGAT ATTCAGTGGT TTTTCCAGGT TGTCAATGAC ATGCTAAAAG CCAAGGTTAC
CGAGAAAGGA AAAGTTGCAC TGGTTGTAAA CTACAACGGA TTTGATGTTC G
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| Protein sequence | MASVVWRRPC TRLLSTVQYT LSASRVYRRS AVYLSVSTIQ LSVRSFSDKH DLESPKKRLH
YEIPQRVRQK VVSASDAVAL VRDGDTVSCS GFVAQGVAEA VLKALGERYD RTGHPNNLTL
LFGGGPGDWD SRGLNHLGKY SEDSSKPHML RRTIGSHYGQ TPKVAHMALQ NMVEAWTLPL
GSVSRMIRAQ ATHSPGHITE VGIGTYIDPD ISGGATNETA LESPLHSKLV QKLDIDGRPN
LMYKALPIHV AIIRGTTGDC RGNISIEEES VICDQKILAA AAKNSGGIVI AQVKRLAADG
TIPCRSVAIP GPLVDAVVVV DEKDHDSLHP MSYVERNNPS LTGQIKTPQD EVQKMPLDVR
KLIARRAFFK LSPDQIVNLG IGLPEGIASV AAEEDMLQYI TLSTEVGVFG GLPASGHNFG
PAYNATAMVE MNQMFDFYDG GGLDICFLGA AQIGKNGDVN VSRMSKDRLT GPGGFIDITQ
STRRIGFVMA FTAKGLEVDI PGDGKLGIKQ EGRVKKLVSS VFEKTFSGDE AVRRGQEVTY
ITERAVFRRT GKFDVQN
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