Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13779 |
Symbol | |
ID | 7201932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 585948 |
End bp | 586862 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181231 |
Protein GI | 219121767 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.760626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTGCCGCACG CATCCCTGCA CGGCGTCTAC GAATCCCTCA TTTTTGAAAC CGACATTGGC CAAGATTTAC TTTCTTTCGC TTCTTCGGCC TCGTTATTCG CCGACCAACA CGTGCAAAGC CACGTGGTGC ACTGGAATCG GCTTTTGCTG CTCCACGGGC CGCCGGGTAC GGGTAAGACC AGTTTAGGTC GCTCCCTGGC GCACAAGCTC GCGATACGTA CTTCCGCACG ATTTCCAAGA GCCAACCTGC TCGAGATCCA CTCACATTCG CTCTTTTCCA AATGGTTCTC CACGTCCGGT AAACTTATTC ATCGAGTTTT TGAGCTTATT CGAGATATGG TGCAGGATGA CCCGTCCTGT TTGGTTTGTG TGTTGATTGA CGAGATTGAG AGCCTGGCGG CAAGCCGGTC AGCTTTGACC AGTACTGGGG AACCGTCGGA TGCGCTCCGG GCCGTCAATT CTTTGTTGAC CAGCTTGGAT CGACTACGAT CCTTACCCAA TGTATTGGTG ATCGCCACCA CCAACTTGAC CGCCTCCGTG GATGCCGCCT TTTTGGATCG CGCCGATCTC AAAATATACA TCGGATTGCC TTGCCTCCAA GCCCGTTACG AAATTTTGCG ATCCTGTTTA GACGAACTTG CGCGGGTCGG GATACTAACA ATATCGAATC CTTCTTCCGA CGCATTGCTT GCCTTCCGAG ACATTGCTCG GTCGGACGAG AGCCAACCGA GCACGGTATT GGTGTCGTTG GCGGGGATGG CCGAGGGCTT GAGCGGACGC AGTTTGCGTC GGCTGGCCTT GCAAGCACAC GCCCTGTTTG TCCGTCGACC CCAAGCCTCG CTCACGCTCT TTTTGAGCGC ATTGCAGCGA ACCATCGAAC GAGAAATTGG CAGCCTTCCG TCTCCGCTGG TGTAG
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Protein sequence | LPHASLHGVY ESLIFETDIG QDLLSFASSA SLFADQHVQS HVVHWNRLLL LHGPPGTGKT SLGRSLAHKL AIRTSARFPR ANLLEIHSHS LFSKWFSTSG KLIHRVFELI RDMVQDDPSC LVCVLIDEIE SLAASRSALT STGEPSDALR AVNSLLTSLD RLRSLPNVLV IATTNLTASV DAAFLDRADL KIYIGLPCLQ ARYEILRSCL DELARVGILT ISNPSSDALL AFRDIARSDE SQPSTVLVSL AGMAEGLSGR SLRRLALQAH ALFVRRPQAS LTLFLSALQR TIEREIGSLP SPLV
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