Gene PHATRDRAFT_13779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13779 
Symbol 
ID7201932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp585948 
End bp586862 
Gene Length915 bp 
Protein Length304 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181231 
Protein GI219121767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.760626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGCCGCACG CATCCCTGCA CGGCGTCTAC GAATCCCTCA TTTTTGAAAC CGACATTGGC 
CAAGATTTAC TTTCTTTCGC TTCTTCGGCC TCGTTATTCG CCGACCAACA CGTGCAAAGC
CACGTGGTGC ACTGGAATCG GCTTTTGCTG CTCCACGGGC CGCCGGGTAC GGGTAAGACC
AGTTTAGGTC GCTCCCTGGC GCACAAGCTC GCGATACGTA CTTCCGCACG ATTTCCAAGA
GCCAACCTGC TCGAGATCCA CTCACATTCG CTCTTTTCCA AATGGTTCTC CACGTCCGGT
AAACTTATTC ATCGAGTTTT TGAGCTTATT CGAGATATGG TGCAGGATGA CCCGTCCTGT
TTGGTTTGTG TGTTGATTGA CGAGATTGAG AGCCTGGCGG CAAGCCGGTC AGCTTTGACC
AGTACTGGGG AACCGTCGGA TGCGCTCCGG GCCGTCAATT CTTTGTTGAC CAGCTTGGAT
CGACTACGAT CCTTACCCAA TGTATTGGTG ATCGCCACCA CCAACTTGAC CGCCTCCGTG
GATGCCGCCT TTTTGGATCG CGCCGATCTC AAAATATACA TCGGATTGCC TTGCCTCCAA
GCCCGTTACG AAATTTTGCG ATCCTGTTTA GACGAACTTG CGCGGGTCGG GATACTAACA
ATATCGAATC CTTCTTCCGA CGCATTGCTT GCCTTCCGAG ACATTGCTCG GTCGGACGAG
AGCCAACCGA GCACGGTATT GGTGTCGTTG GCGGGGATGG CCGAGGGCTT GAGCGGACGC
AGTTTGCGTC GGCTGGCCTT GCAAGCACAC GCCCTGTTTG TCCGTCGACC CCAAGCCTCG
CTCACGCTCT TTTTGAGCGC ATTGCAGCGA ACCATCGAAC GAGAAATTGG CAGCCTTCCG
TCTCCGCTGG TGTAG
 
Protein sequence
LPHASLHGVY ESLIFETDIG QDLLSFASSA SLFADQHVQS HVVHWNRLLL LHGPPGTGKT 
SLGRSLAHKL AIRTSARFPR ANLLEIHSHS LFSKWFSTSG KLIHRVFELI RDMVQDDPSC
LVCVLIDEIE SLAASRSALT STGEPSDALR AVNSLLTSLD RLRSLPNVLV IATTNLTASV
DAAFLDRADL KIYIGLPCLQ ARYEILRSCL DELARVGILT ISNPSSDALL AFRDIARSDE
SQPSTVLVSL AGMAEGLSGR SLRRLALQAH ALFVRRPQAS LTLFLSALQR TIEREIGSLP
SPLV