Gene PHATRDRAFT_13725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13725 
Symbol 
ID7202048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp611387 
End bp612577 
Gene Length1191 bp 
Protein Length397 aa 
Translation table 
GC content57% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181409 
Protein GI219122137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.829613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACGCTCTGA TACATACCCG CCGGACGCTA CACCAACGTC CCGAACTCAT GTATCAGGAA 
TCCCAAACCT CGGCCATTGT CCAGAAAGCC TTGACCGAAA TGGGTATTTC CAATTTCACC
ACCGGCTGGG CCGTCAATAC GCATCCCGAT GTCATTCCCG GTCCGGGAGG CTACGGAATT
GTGGTCGACA TTGGGACGGG ACAGGCTCCC TGCGTCCTCC TCCGTGCGGA CATGGACGCC
TTGCCCATTC TCGAACAGAC CACGAACGTG GACGCCTTTC GATCGCAGAC AGACCACCAA
ATGCATGCCT GCGGGCACGA CGGACACACC ACCATGTTAC TCGGTGCGGC GGCGATCCTC
AAAGGCATGG AGGCGTCACT GCCTGGGACA GTCCGGATCA TGTTCCAGCC GGCCGAAGAA
GGTGGAGCCG GGGCCAAGCG CATGCGGGAA GAAGGCGTTC TGAAGCAAGC TCCCCAGCCA
TCTTACGCCT TTGGGATGCA CGTGTGGCCG ACTTTGCCTT CGGGGGTTGT AGCGACCCGA
CCCGGACCGC TCTTGGCTGC CTGCGAACGC TTCGAAATAC TCTTGGCCGG GGTTGGAGGA
CACGCCGCCA TGCCACACTT GACGATCGAT CCAATCGTCA CCGCGAGCGC GATTGTCATG
AACTTACAAA CCATCGTGTC GCGGACCATT AGTCCGCTCG AATCCGGAGT TTGTAGCATT
ACCAAAATCG AAGGTGGGGA TGCCTTTAAC GTTATTCCGC ATTCGGTACT GTTGCGGGGG
ACGATTCGAG CGCTTCGTAC GGAAACGTTG CTGAGTCTGC GGGACAAGGT CGAGCATATT
GTGGAAAGTA CGGCGGCCAC GCACGGATGT AACGTGACGA TTTCCTATTC TCCGGATTAT
TATCCACCGA CCGTGAACGA TCCGGACTTG TACGAGACAT TTGCCAAACA CGTGGGTGCT
ATGGTATCAT CGGAAGGAGT CATACGGGAT ACGGAACCCA CCATGGGCGC CGAAGACTTT
TCTTTCGTGG CCGAAAGCAT TCCAAGCGCA TTTTTCTTGC TCGGGCAAGG CAGTGGCACG
GATCCGCCTA CTGATTACGG GTTGCATCAT CCCCATTTTG CCTTGGACGA ATCGGTTCTG
CCGCAGGGCG TCGAGTTGCA CGTCAATTTG GCTCTGCGAG CCTTGCAGAA A
 
Protein sequence
DALIHTRRTL HQRPELMYQE SQTSAIVQKA LTEMGISNFT TGWAVNTHPD VIPGPGGYGI 
VVDIGTGQAP CVLLRADMDA LPILEQTTNV DAFRSQTDHQ MHACGHDGHT TMLLGAAAIL
KGMEASLPGT VRIMFQPAEE GGAGAKRMRE EGVLKQAPQP SYAFGMHVWP TLPSGVVATR
PGPLLAACER FEILLAGVGG HAAMPHLTID PIVTASAIVM NLQTIVSRTI SPLESGVCSI
TKIEGGDAFN VIPHSVLLRG TIRALRTETL LSLRDKVEHI VESTAATHGC NVTISYSPDY
YPPTVNDPDL YETFAKHVGA MVSSEGVIRD TEPTMGAEDF SFVAESIPSA FFLLGQGSGT
DPPTDYGLHH PHFALDESVL PQGVELHVNL ALRALQK