Gene PHATRDRAFT_13617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13617 
Symbol 
ID7202120 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp242144 
End bp242848 
Gene Length705 bp 
Protein Length201 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181335 
Protein GI219121983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.629391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACCCGAATG TTCTAGGTTG TATTGAAGTC CTCCAAGATG ACGATTTTCT ATACTGCATC 
ATGCCTTATT GCGCTGGAGG TGACTTGTAC GGCGCAGTGA TGAAAAACTG TGAGTCAGAA
TCGAGTTTGA AGTCTAGCCA ATCGCCAGTC CGTCCGAACG AAAAACAAGC TCGTACCCGA
TTTCGGGAAC TTCTAGCGGG ACTTTCTCAT CTTCAGAATA AAGGAGTTTG TCATCGCGAC
TTGTCGTTGG AAAACCTGTT GTTGGACGAG ACTGACCAAG TTGTAATAGG GGACCTCGGA
CTTGCTCTTC GTGTGCCGTA CACTGATAGC AGTACATTTT ACGGAGCCGT CTGTGACGTT
TCTGAAGGGT CCCAGCGCTG TCTCATAACG GCACAGGGTA TTTGCGGAAA CTTGACCTAC
ATTGCCCCCG AAATCATTGC TGGTGAGGAT TTTGACGGTT ACGCTGTTGA TCTTTGGTCG
GCGGGTGTGA TCCTCTTCAT TATGCTTGTC GGCCGTGCTC CGTTTCGATG GGCGCACAAC
TCTGATCAGA GATTTGCGCA GATATCGTCC AACCGCCTTC GCGAAATGAT CAAACACATA
GGAATCCCAC TGAGCAATAC TGTTATTGAT TTGCTCCAGA ATATGCTTTG TCGTGAACCA
AACAAACGGC TTCTTCTCCG TGAAATCTTG TCGCATCCTT GGATG
 
Protein sequence
HPNVLGCIEV LQDDDFLYCI MPYCAGGDLY GAVMKNFRPN EKQARTRFRE LLAGLSHLQN 
KGVCHRDLSL ENLLLDETDQ VVIGDLGLAL RRCLITAQGI CGNLTYIAPE IIAGEDFDGY
AVDLWSAGVI LFIMLVGRAP FRWAHNSDQR FAQISSNRLR EMIKHIGIPL SNTVIDLLQN
MLCREPNKRL LLREILSHPW M