Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13617 |
Symbol | |
ID | 7202120 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 242144 |
End bp | 242848 |
Gene Length | 705 bp |
Protein Length | 201 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181335 |
Protein GI | 219121983 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.629391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACCCGAATG TTCTAGGTTG TATTGAAGTC CTCCAAGATG ACGATTTTCT ATACTGCATC ATGCCTTATT GCGCTGGAGG TGACTTGTAC GGCGCAGTGA TGAAAAACTG TGAGTCAGAA TCGAGTTTGA AGTCTAGCCA ATCGCCAGTC CGTCCGAACG AAAAACAAGC TCGTACCCGA TTTCGGGAAC TTCTAGCGGG ACTTTCTCAT CTTCAGAATA AAGGAGTTTG TCATCGCGAC TTGTCGTTGG AAAACCTGTT GTTGGACGAG ACTGACCAAG TTGTAATAGG GGACCTCGGA CTTGCTCTTC GTGTGCCGTA CACTGATAGC AGTACATTTT ACGGAGCCGT CTGTGACGTT TCTGAAGGGT CCCAGCGCTG TCTCATAACG GCACAGGGTA TTTGCGGAAA CTTGACCTAC ATTGCCCCCG AAATCATTGC TGGTGAGGAT TTTGACGGTT ACGCTGTTGA TCTTTGGTCG GCGGGTGTGA TCCTCTTCAT TATGCTTGTC GGCCGTGCTC CGTTTCGATG GGCGCACAAC TCTGATCAGA GATTTGCGCA GATATCGTCC AACCGCCTTC GCGAAATGAT CAAACACATA GGAATCCCAC TGAGCAATAC TGTTATTGAT TTGCTCCAGA ATATGCTTTG TCGTGAACCA AACAAACGGC TTCTTCTCCG TGAAATCTTG TCGCATCCTT GGATG
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Protein sequence | HPNVLGCIEV LQDDDFLYCI MPYCAGGDLY GAVMKNFRPN EKQARTRFRE LLAGLSHLQN KGVCHRDLSL ENLLLDETDQ VVIGDLGLAL RRCLITAQGI CGNLTYIAPE IIAGEDFDGY AVDLWSAGVI LFIMLVGRAP FRWAHNSDQR FAQISSNRLR EMIKHIGIPL SNTVIDLLQN MLCREPNKRL LLREILSHPW M
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