Gene PHATRDRAFT_13566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13566 
Symbol 
ID7202230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp118050 
End bp119012 
Gene Length963 bp 
Protein Length320 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181139 
Protein GI219121575 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATATC AGCGTTTCCC TCGCGTTGAA ATCCTTTCTA TACAACCTCA AGAAATCAAA 
TTTATCTTGT CGGAAAGCGA CACGAGCGTT GCCAATACAC TCCGTCGAAT TATGATCGCC
GAAGTCCCGA CGCTTGCAAT TGATTTGGTA GAATTTCACG AAAATTCCAC CGTCTTGAAC
GATGAGTACA TTGCCCATCG TATGGGTCTG ATACCTGTCC GCTATCAGCC TGCGGAAAGC
CTAAAGGGCA GCGACTGTTC GGACGCCTTT TTGCCTCACC GTGAATGCGT ATGCTATGAA
CACTGCATGA GATGCTCAGT CGAATTTGAG TTGGATATCA CGTACAAAGT GACGGGGGAA
GAAGACGTCT TGGCACCACT GACGGTCACT AGTAAAGATC TCGTGTCCAA TAACGAACTC
GTTCAGCCGG CTCATTTTTT GTCACAAGAC GAGCAAGACG AAGCCCAGGA CGAAGGCGTC
GCGATCGTCA AATTGGGACC AGGGCAGCGC TTGAAATTAA AAGCAATCGC CCGTATGGGA
ATATCTAAAG AGCATGCCAA GTGGTGTCCG GTTGCGGTGG CAACATACCG CTTCTGGCCC
GAGATTCACA TTAATGACGA GCAAATGGCA ACACTCACTC TTGAACAAAA GCAAGAGCTT
GTGGACACAT GTCCGGATCG TATTTTGGAG CTTGATGAAG TGACTGGGGA CATTCGAGCT
GTAGACAATG CCTGGGATAT TTGCACATAC ACGGAAGATC TTAAGTTTGC GCAGGCAGCT
ATGAAGAAAA GGCCAGAAGA TGACGATTTT GTAACGGTGA CCCAGTCGAA GGATAGGTTT
ATCTTCAATG TAGAGACAAC TGGCGCTATG GACGCTGACG AAATTCTTTT ATCGGCAATT
CGAGTACTGC GGAACCGATT GAACTACTTA GCCCAAGAAC TCGAGAATTT AAAAGACATG
TAA
 
Protein sequence
MPYQRFPRVE ILSIQPQEIK FILSESDTSV ANTLRRIMIA EVPTLAIDLV EFHENSTVLN 
DEYIAHRMGL IPVRYQPAES LKGSDCSDAF LPHRECVCYE HCMRCSVEFE LDITYKVTGE
EDVLAPLTVT SKDLVSNNEL VQPAHFLSQD EQDEAQDEGV AIVKLGPGQR LKLKAIARMG
ISKEHAKWCP VAVATYRFWP EIHINDEQMA TLTLEQKQEL VDTCPDRILE LDEVTGDIRA
VDNAWDICTY TEDLKFAQAA MKKRPEDDDF VTVTQSKDRF IFNVETTGAM DADEILLSAI
RVLRNRLNYL AQELENLKDM