Gene PHATRDRAFT_13557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13557 
Symbol 
ID7202099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand- 
Start bp137089 
End bp137769 
Gene Length681 bp 
Protein Length226 aa 
Translation table 
GC content48% 
IMG OID 
Productproly 4-hydroxylase 
Protein accessionXP_002181308 
Protein GI219121927 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.428415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGTG CTGTCACTTT AGAAACCCTA TCACTTGTGC CGCTCGTCTT GTCCGTCGAA 
GGATTTCTTT CGGATGATGA GTGCACCTAC ATTCAGGAAA CTGCCGAGCC TCACATGGAG 
TATTCCGAGG TCACACTCAT GGACAAAGAC CAAGGTCGAC CGGCATCAGA TTTTCGGACT 
TCCCAAAGTG CTTTCATTCG AGCCCACGAT GACGCAATAC TTACGGATAT TGATTACCGG 
ACTGCGAGTC TCGTTCGTAT ACCACGTAGA CACCAGGAAG ATGTACAGGT CCTGCGCTAC 
GATGTAACCG AGAAATACGA TTCGCACGCT GATTATTTTG ATCCAGCGCT CTACACGAAA 
GACAAGCGAA CATTAGCGCT CATTAGAAAC GGGCATCGTA ACCGCATGGC AACCGTGTTC 
TGGTACTTGA GTGATGTAGA AAAAGGAGGC GAAACGGTCT TTCCTCGCTT CAATGGGGCA 
CAAGAGACAA GCATGAAAGA TTGTAAAACT GGGCTCAAGG TCAAACCAGA AAAAGGTAAA 
GTCATCATAT TTTACAGCAT GACACCCGAT GGTGCATTAG ATGAATACAG CTTGCACGGT 
GCTTGCCCTG TCCAAAAAGG CACCAAGTGG GCGGCTAACA AATGGGTCTG GAATGAGCCA 
ATGCAATTCG TTCCTTCGTA G
 
Protein sequence
MSRAVTLETL SLVPLVLSVE GFLSDDECTY IQETAEPHME YSEVTLMDKD QGRPASDFRT 
SQSAFIRAHD DAILTDIDYR TASLVRIPRR HQEDVQVLRY DVTEKYDSHA DYFDPALYTK 
DKRTLALIRN GHRNRMATVF WYLSDVEKGG ETVFPRFNGA QETSMKDCKT GLKVKPEKGK 
VIIFYSMTPD GALDEYSLHG ACPVQKGTKW AANKWVWNEP MQFVPS