Gene PHATR_5396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_5396 
Symbol 
ID7204431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp692794 
End bp693288 
Gene Length495 bp 
Protein Length165 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185933 
Protein GI219121417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.751288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTTGT CAGTGAACAG TCCAGGGGGA AGTGTGGCAT CCTACGGCCT TGCAAGTGCG 
CAAATAGAAC GTTTGGCGAA CGTGGTAGGT ATCACCACGA CGGCGTGTGT CGATCGATAC
GCTGCTTCCG GTGGATACAT GATTGCCAGT CAAGCCCATC GAATCGTGGC AGCGCCGTTT
GCCTCGGTCG GGAGCGTCGG AGTAATCATG GAAGGACTCA ATTTTCATGA TTTGGCGAAA
CGATATGGTG TCCAGCCTAT GATTCTGAAA GCGGGCAATG AAAAGAATCC GCTAACGACT
TTCGGCTCCG TGTCAAAGCA GGATTTGAAA CACGAGACCG AACGTCTCGA GAAAGTTCAC
GACGCCTTTC GACAGCTCGT TGTTCGCGGA CGTCCCGAGC TAGCGGACAA GCTCGACGAA
GTTGCTAACG GAAATGTTTT CCTAGGGCTG GAAGCTGTTG AGTTGGGACT TGTTGACGCG
GTGATGACAT CTGAC
 
Protein sequence
VILSVNSPGG SVASYGLASA QIERLANVVG ITTTACVDRY AASGGYMIAS QAHRIVAAPF 
ASVGSVGVIM EGLNFHDLAK RYGVQPMILK AGNEKNPLTT FGSVSKQDLK HETERLEKVH
DAFRQLVVRG RPELADKLDE VANGNVFLGL EAVELGLVDA VMTSD