Gene PHATR_46950 details

Gene Information

• Locus tag: PHATR_46950
• ID: 7204767
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: -
• Start bp: 905418
• End bp: 907639
• Gene Length: 2222 bp
• Protein Length: 671 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002185977
• Protein GI: 219121509

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0566418
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGCGTTTTTG TTCTCGTATA TTCCTTATCA TGCTGGACAG TTCTATCGCA TCCAACGCAA 
GTAAGAGTTC CACCAACAAC GCTTCCACAG TTGCAAAAGA ACCTTGTCCA GTGAAAGGAT 
CCGTGACCAA CACCTACCAC CCAATTCCGC AGAACTGGCA TTCGCAAGGG CACTTACATT 
TACTATAAGG TCGATCCACA CAGCACATGA ACAGGTCTAC AGCGGGTGTT CCGTCCGCAA 
TCGGGGAGCG CCAGATGGAA ACCATGGAAA TCATGGGGAG TCCCGTCGAC GACGTGGATG 
CCACCGATAT GGACGAAGAG GAGTCGATGC CAGATGATTT CGAAGCTCGT TATCCTCTTT 
CGAGGCATAT TGCCGGATGG AGATTCTGGT GGGCCTTTGC CAAGTACCCG TTGGCTCTAC 
TCCTCATCAA CACGGTTGTG TTGCTTTTCC TGTCCCTGTA CAATCCAAAA AATGACTACC 
AAGACACCTA TAACAATGAT TGGGAGACGA GCTCGTTAAT GCTCATGATG ACGAGGTTTC 
GTGTCAAATG CGTAGGGGTG GTAGTGATGG CATTCTTGGA TATCATTTTC CTGTACTTGG 
CCGCCGCGTT TCTTCGGAAG GATATGCACT TGCTAGTGAG GGAGCATCAA GCACAGGACT 
CGCAAGCACA AAGCGCCGAG ACGCAGAGTC CGATATGGAG AACAGCGGCA CCGCTCCCGC 
AATTAGATTT GAAGGTACTG GACCACGTGC ACGCTCGAGT CGCGCAAAAG GTAGACGCGT 
ATCTTCATCG CGATCCAGCA TGGCAATCAA CGTTTCCCTT TTTGGTCAGC TTGTTGTACC 
TGCTTATGGC ACTCGCGGCG ACGGCTTCTC TGACTTCGGT TTTGCTGCTG ATATTTGTAA 
ATAGCGCGCA AGGAATGTCT CTGTGTACAG CAAGGGACAC CAATGTCATC AAATTCAATC 
AGACAGATGG TGTCCCGGAA GATTTGCTAG ACTGGGCGAA CGAAGGATCC TCCGTTGAAG 
CAACATACGT CCGTCTATCC GATGGGACTC TTTACTTCCG AGGGTCTGCA GCATATATAC 
AAGAACCTAC AATGCTTTCT GTTTACCATG GTATGAGGAT CAACGGGTTT CATTCTATAG 
AATCTGACAG GGATTCAAAC CTAAGGCTGC TTGCGTCCAA GGCGGATGGA AGTGTTTCCA 
TGTATAGCCA TGTGAGCAGC CCTACGTTTT TTGCAAGTGT CTTGGAAGAC AACAGTGGAA 
CATCAACTTC CTTCTGTTTC TTGTACAAGG AGGTGGTCCA GGAAGGCTAC GATATAGATA 
CCTTCTTCTC TGTCCCCTAC GCGAGTAGTG TCTTCTCTGT TGCTTGCATT GACTCTAAAG 
AAGATGCCAA TCAAGAAGTT CGGAACACTA CTTTTTCCAG CAGCAACCAA CAGGAACTGA 
GATCATGTTT GGGCAGAGCT TATGATGGTG AGTACTGGGT ACGCCAGGAT GGAGTAGATA 
GGCATTTTTG GTCCATCCAA GAAGTGCAAA TAGTACGAGT GAATCCACAA ACCATGGTGG 
CTACAACAAT TGCCAATAAA ACCCATTCCC GTGACTTTCG ACCGGTGTGG TCCAGAGAAG 
GAAAATGCAA CCTTCGGATC CAAGAAATTG GATATAGTGC TGCTGCAGTA TTTCTGTTTA 
TTTTTGCTCT TGCAATGGAA CAAACTTTGA AAATTCCATC AAGTGCGGGT TGCTTGGCTA 
TGTCTATCGT TGCAACTCTG ACTTGGATAG ATGAAACGTT GGCAGGCTTG CTAAGTCTCG 
TGCTGATTAT TGCGACAGCT TTTTACTTGA TCATGGGGTC ACCCAGCTTA GTTGTCCGAG 
AGCAGATGCT GTGGGGAATG TACTGCGTTA TCATCCTGCA ACTGGTTTTC GAATTTTACC 
CCGTGGTGGT TTTTGGCCTG GGTCTGGGCA TTGCTCGGGA CCATCCCGTA CTTCAGCTGG 
GTGGCTGGAT TGGAGGACCA TTTGCTGTCT TTTTTCTTTT GTTCTACTCA ATCACTGATT 
CCATTGATTG GTTGGAACTG GTGGCGTTTA TTCCATTGAG TGTCCTTATT GCTTGCGGGA 
TGGTGACGGC AGGGAATCAA CTCACAAGAT ACCGCCCATT TCTGCTGTTC TACCTGAGGC 
GTTTGTGGCG ATCGCTTTGC CTGAAAATAC GGCCGCAAAT TCGACAACAA AGCAGAAGCT 
GA 

 

Protein sequence

MNRSTAGVPS AIGERQMETM EIMGSPVDDV DATDMDEEES MPDDFEARYP LSRHIAGWRF 
WWAFAKYPLA LLLINTVVLL FLSLYNPKND YQDTYNNDWE TSSLMLMMTR FRVKCVGVVV 
MAFLDIIFLY LAAAFLRKDM HLLVREHQAQ DSQAQSAETQ SPIWRTAAPL PQLDLKVLDH 
VHARVAQKVD AYLHRDPAWQ STFPFLVSLL YLLMALAATA SLTSVLLLIF VNSAQGMSLC 
TARDTNVIKF NQTDGVPEDL LDWANEGSSV EATYVRLSDG TLYFRGSAAY IQEPTMLSVY 
HGMRINGFHS IESDRDSNLR LLASKADGSV SMYSHVSSPT FFASVLEDNS GTSTSFCFLY 
KEVVQEGYDI DTFFSVPYAS SVFSVACIDS KEDANQEVRN TTFSSSNQQE LRSCLGRAYD 
GEYWVRQDGV DRHFWSIQEV QIVRVNPQTM VATTIANKTH SRDFRPVWSR EGKCNLRIQE 
IGYSAAAVFL FIFALAMEQT LKIPSSAGCL AMSIVATLTW IDETLAGLLS LVLIIATAFY 
LIMGSPSLVV REQMLWGMYC VIILQLVFEF YPVVVFGLGL GIARDHPVLQ LGGWIGGPFA 
VFFLLFYSIT DSIDWLELVA FIPLSVLIAC GMVTAGNQLT RYRPFLLFYL RRLWRSLCLK 
IRPQIRQQSR S