| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46949 |
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| Symbol | |
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| ID | 7204766 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | - |
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| Start bp | 901558 |
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| End bp | 904135 |
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| Gene Length | 2578 bp |
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| Protein Length | 633 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185976 |
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| Protein GI | 219121507 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.779504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATCTTTCTTT CCCCCAAAGA GGTATCTTTT GCAACGTGTG TCTATTTGCG GTACCCTCGT
TCGTGCAGGA TTCTGTCAAC AATGTTGTCT CGCGTTCGTC ACGGTAGCTG TCAGCATCTG
TCATCGACGA TCGTTCACTT CCGAGTCCGT TTTCGGCTTT GAAACTTTCA GCATTTCACC
AAAGATCCTC CATTTGTCCC GTACGAAACA CTCTTGGTGG TTACGTTTCT ATCCTTCCAG
TAGAGAAGCG CTTGCTACGC AATCTGTAAT AGCTCCGTTT CCAGGCAGAA CACTTTCGAC
TGCGGGTTGT CGGGATTTAT CGACGGACGG AAGGAACATC CATACACGTA TCGCATTTAC
GTATCAAATA CACGTATCGC ATATACGCAC CCGTCGTCGA CACGAAAAGG ATGAACGCGT
TTACTACGGG ACCGGAGTCA ACTGCTGCCG ACCGCCACAA CAGACGCGCC ACGGGAATTT
CTTCCGAGGC AGAAGAACGC CGGATGGAAA CCTTGGAAAT CATGAACACA CCAGTCGAAA
ACGATGCGGA AGAGGAGAAT GATGATGACG ACGAAGAAGA AGAGGCGATG GCGCCTGTTG
CTGGATGGAG ATTCTGGTGG ATCTTTGCCA GGTTTCCGCT GGGTCTGCTC CTCGTTAACA
CGATCCTTCT CGCTTTAATC ACCCTATACA ATCTACAATA CTCGCCTTCG TATATTGTGG
GAAACTCGAC GCACGCTGTA TTGAACGACG ACTTCGATTC CGACGAGCGA AGGGATTTCG
GGCTTGCGCA GTTCAGTGCG CTCGAACTGC AATCATGGAT TGTCAAATGC GGGATGGTAG
CCCTCTTAGC TTGCCTGGAT GCTATTGTCT TTTACTGGTT CACAGTACGT CTCAAGAAGG
GCATGGAATT GCTTGCGCGA AAGGCTCAGC AAGAAGAGCC TCAAGGACGG CCAGTCGCAA
ATGAGAATCT GAACAGGCCA AGAACGGCAC CGTTGCACAA GTTGGACTTG AACTACAGCG
AACTGGACCT GGTACACGCT CGGGTGACCC AAAAGATAGA CTCGTATCTA TTTAGGGACC
CAGCGCGGCA ACCGACCGTC CCAATCTTGG TCAGCCTGTT GTACCTACTG ACGGCACTCA
CAGTGACTGC TTGTCTGACT GCGCTATCAC TTTTGATATT TTTGTACAGC TCCGAAGGAT
CTTCCATGTG CTTGAAGAGT ATCACATCAC AGTCAGGTGA TTCCGTGGAA TTTGATATTG
ACTCGTTAGA AAATATCCCG CAAGAACTAA AGGAATGGGC AAGTCAGAGA TATTCATATT
CTGATGGATC ATCATACATT CATATGAGTG ACGGAACTAC TTACTTTCGC GGTAGAATGG
CCGAAAAGGA ACATCATGGT TGGGATTCCT ATATGGATAC GGAAACACTA GTTGCGACCA
ACGTAAATGG AAATCTTACT GTGTACAGTC AACTCCACGA ACCGCATAGC TTCGTGAGTA
TTAACGAAGG TTCTGGTGAA ACAATGGAAG GATTCTGTTT CCTCTATACG GAGTTTGTTG
GACACGACGA CGAGGAAATA TATGAATACA CAACGCAAGC AGTTGCGTGT GTATCTTCCA
ATGAAAACAT AAGTCAGGGA TTTCGAAACA CAACTCTTCT AAACAGTGAC GGAGGGGGAT
GGTTAGAATC CGTTGGCAAA GCTCACGATG GACGATACTG GATCAGGCTG CAAGAGGATA
GATTTGTTGA TGAGTGGTCG TCGTATCAAG AGGTTTTGCA TATCATACAG CTGGACCCGC
AGTCGATGAT GTATACTGTA GTTGCAAACT CAACTTCCTT CCCCGATTTT CAACAACCCT
TGAGGAACGA AGGAAGTAGA TGTTTCCGCT GGACTAGCGG CATTGGGTAC GTTGCTGCCG
CAATATCTCT GTTTCTTTCG GCGCTGGTGC TCCTACTATT CATCAAGACA AAGTCGGGAG
CAGGTTGCTT GGCGTTGTCT ATCTTTGCAG TCCGACTTTG GCTGGAAGAA ACTTGGCTAG
ACATGCTGAG TCCAGTATTG CTTGTTTTTA CATTCATATG CTTGTGCACG GCATCACTCA
GCCTTGCCGT CCGAGAGATG GTGCTATGGG GAATATATAG CGTCATTGTG GTGCAATTGG
TTTTAGCTTT TGTGAACCGA GAATTTCCGG TAATGGGGAC TATTGGACTA GGTATGGGCC
TCGCGCTGGA CCATCCTGTA CTTCAGCTGG GTGGGTGGAT CGGAGCGCCT TTATCGGTTT
GTATTCTCTT GTACTATGCG ATAGTTGGCT ATTTCGGCAA CACTTATGGT GGCTACTTCT
ACTATGATCG ACAGTATACT ACTACTCTAC TGATTGTTGC ATGCATCCCT GTAAGTATAA
TTATCGGTTG CGGGATGGTG ACGGCAGGCC TTTACTTTTC AAGGTCTCGT GCAGTCTTGT
TGTTCTATCT GAGGCGCTTC TGGCGATCTC TTCGTGTGAA ACTGCGGAGG CGAAGTCGGC
CTCAAAGCAG CAATAGCGAA ATGGTCTAGT TCACATAAAA TTCTTGTTTG TATTTATG
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| Protein sequence | MNAFTTGPES TAADRHNRRA TGISSEAEER RMETLEIMNT PVENDAEEEN DDDDEEEEAM
APVAGWRFWW IFARFPLGLL LVNTILLALI TLYNLQYSPS YIVGNSTHAV LNDDFDSDER
RDFGLAQFSA LELQSWIVKC GMVALLACLD AIVFYWFTVR LKKGMELLAR KAQQEEPQGR
PVANENLNRP RTAPLHKLDL NYSELDLVHA RGPSAATDRP NLGQPVVPTD GTHSDCLSDC
AITFDIFVQL RRIFHVLEEY HITVRMAEKE HHGWDSYMDT ETLVATNVNG NLTVYSQLHE
PHSFVSINEG SGETMEGFCF LYTEFVGHDD EEIYEYTTQA VACVSSNENI SQGFRNTTLL
NSDGGGWLES VGKAHDGRYW IRLQEDRFVD EWSSYQEVLH IIQLDPQSMM YTVVANSTSF
PDFQQPLRNE GSRCFRWTSG IGYVAAAISL FLSALVLLLF IKTKSGAGCL ALSIFAVRLW
LEETWLDMLS PVLLVFTFIC LCTASLSLAV REMVLWGIYS VIVVQLVLAF VNREFPVMGT
IGLGMGLALD HPVLQLGGWI GAPLSVCILL YYAIVGYFGN TYGGYFYYDR QYTTTLLIVA
CIPVSCSLVV LSEALLAISS CETAEAKSAS KQQ
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