Gene PHATR_46933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46933 
Symbol 
ID7204462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp854712 
End bp855548 
Gene Length837 bp 
Protein Length256 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185967 
Protein GI219121488 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTAACAACAA ACAAGAAATA GAAAATTTTT TACTCAAAGT CAACACATAC ATCCTTTGCA 
ATCACCATGT CAATCGCTTT CGCTTCCACC CATGGGTGTA CCAAGGCCGA AAAGACTGCT
ATTGTGGCCA TGCTTATCCT CGGTATGGGT ACTTTGGTGT TTGGAAACGA CGTCGCCGGG
ACCGAGGTCG GCTCATCTAC TCTTGCCCAA CCAAGGACCG CGTTCTTGGA TGAGGCAATG
ATTGATGTGC AACCATCTCG GAGATTGCGG AACACATATT TTGACAACGG TAGTAGCGTG
GGTCATAGAC GTCTTCAAGG TACTTTTGGT ATGAATACTG GTGTAAACGG AAAAGGTAAC
GAGAGCGGGA AGAGTGGAAA GGGGGGTAGC AGCAAGAGCT CAAAGAGCTC CAAGAAATCT
GAAGGTCCAA GCATGTCGCC GTCAGTCTCT CCTGCCCCTA CCATCTCCGC TCAACCCTCC
TCAGTACCAT CACTATCTTC TCAGCCTTCG TCTACCCCAT CTGAAGATCC CACTGACATG
CCCTCGGAAG TGCCGTCAGA CGCTCCAAGC GAAGATCCTT CTAGTGTTCC TTCGTCAGTA
CCTACAGTGT CAAACGCTCC CTCTATGTCT TCTGCACCTT CTTCGATTCC TACCGTTTCG
TCGGCTCCTT CTTTTTGTAT CAGCGTGAAA GGCAAAGGAA AGGGCTCGAA GAACTGGAAA
GGAGGAGAAT CCAAGAGTAG CAAAAGCTAT AAGGATTGCT TTGAAGGAAA CGGTTTTACA
CCTTCTCCGA CAAGTGGGAA AGGCGGGAAA GGGGGTAGTA GTAAGAAGAG CATCTAA
 
Protein sequence
MSIAFASTHG CTKAEKTAIV AMLILGMGTL VFGNDVAGTE VGSSTLAQPR TAFLDEAMID 
VQPSRRLRNT YFDNGSSVGH RRLQGTFGMN TGVNGKGNES GKSGKGGSSK SSKSSKKSEG
PSMSPSVSPA PTISAQPSSV PSLSSQPSST PSEDPTDMPS EVPSDAPSED PSSVPSSVPT
VSNAPSMSSA PSSIPTVSSA PSFCISVKGK GKGSKNWKGG ESKSSKSYKD CFEGNGFTPS
PTSGKGGKGG SSKKSI