Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46933 |
Symbol | |
ID | 7204462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 854712 |
End bp | 855548 |
Gene Length | 837 bp |
Protein Length | 256 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185967 |
Protein GI | 219121488 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CTAACAACAA ACAAGAAATA GAAAATTTTT TACTCAAAGT CAACACATAC ATCCTTTGCA ATCACCATGT CAATCGCTTT CGCTTCCACC CATGGGTGTA CCAAGGCCGA AAAGACTGCT ATTGTGGCCA TGCTTATCCT CGGTATGGGT ACTTTGGTGT TTGGAAACGA CGTCGCCGGG ACCGAGGTCG GCTCATCTAC TCTTGCCCAA CCAAGGACCG CGTTCTTGGA TGAGGCAATG ATTGATGTGC AACCATCTCG GAGATTGCGG AACACATATT TTGACAACGG TAGTAGCGTG GGTCATAGAC GTCTTCAAGG TACTTTTGGT ATGAATACTG GTGTAAACGG AAAAGGTAAC GAGAGCGGGA AGAGTGGAAA GGGGGGTAGC AGCAAGAGCT CAAAGAGCTC CAAGAAATCT GAAGGTCCAA GCATGTCGCC GTCAGTCTCT CCTGCCCCTA CCATCTCCGC TCAACCCTCC TCAGTACCAT CACTATCTTC TCAGCCTTCG TCTACCCCAT CTGAAGATCC CACTGACATG CCCTCGGAAG TGCCGTCAGA CGCTCCAAGC GAAGATCCTT CTAGTGTTCC TTCGTCAGTA CCTACAGTGT CAAACGCTCC CTCTATGTCT TCTGCACCTT CTTCGATTCC TACCGTTTCG TCGGCTCCTT CTTTTTGTAT CAGCGTGAAA GGCAAAGGAA AGGGCTCGAA GAACTGGAAA GGAGGAGAAT CCAAGAGTAG CAAAAGCTAT AAGGATTGCT TTGAAGGAAA CGGTTTTACA CCTTCTCCGA CAAGTGGGAA AGGCGGGAAA GGGGGTAGTA GTAAGAAGAG CATCTAA
|
Protein sequence | MSIAFASTHG CTKAEKTAIV AMLILGMGTL VFGNDVAGTE VGSSTLAQPR TAFLDEAMID VQPSRRLRNT YFDNGSSVGH RRLQGTFGMN TGVNGKGNES GKSGKGGSSK SSKSSKKSEG PSMSPSVSPA PTISAQPSSV PSLSSQPSST PSEDPTDMPS EVPSDAPSED PSSVPSSVPT VSNAPSMSSA PSSIPTVSSA PSFCISVKGK GKGSKNWKGG ESKSSKSYKD CFEGNGFTPS PTSGKGGKGG SSKKSI
|
| |