| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46912 |
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| Symbol | |
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| ID | 7204743 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | - |
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| Start bp | 789641 |
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| End bp | 791979 |
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| Gene Length | 2339 bp |
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| Protein Length | 693 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185953 |
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| Protein GI | 219121459 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.744308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTCTCAAGTA CGACACGTGC ATGTAATTGT GCTTTACTAG CTGGTACGGA GATCATCATC
ATCGTCGTCT TGGCGAACCT TACGCGTCAT GTCGAAACGC AAAGGCGAAG ATCTCCCGGT
GTCGCCCGAT GACTTTTCAC CCCCGGGTGT GAAAACACGT TCGATTCGGA AAAGTGGGAA
ACGTCAACGG CGGATCCAAG TAGCCGAAGA GTCGGACGCC GAACCCTCGT CTCCGTCCGT
CGCGGCTTTT CAAAACCCAC CATCTTCGTC GTCATCGATA CCAACTGATC GACAATCCAA
CAACAACAAC AACAACAACA ACAAGAAGGA TGACGACGAC AGGGACGATT CGTCGGATCC
CGAAGACCCC ATGGAAGACT CGAATCGACG ACGACGAACC AACCCGAGTC GAACGTTGCT
GCAGCCGTGA AACCTTCGGC CAACGATTCG ATACCGGTGC CACAGTCGTC CGCACCATCC
TCCTCTACGG CTCGTCCACA AACCACCAAG CCTGTTAACA ACGGTAAAGG TAAAACACAC
GACACTGCAC GGCGCAAGGC TCCACCCGCC GCATCCGGCA GCCCTAAGGA AGCGGGAGAG
AACGTTCCAC TTTCCCGTCG ACTAGACTAT CGAGAAACCG ATACTCGCAA GGAATCTCCA
ACAACGTTGC CTACCGAATC GGTTTTGCGG GAACGGGACG TGTTGGAAAA CGGACACGAC
AAAACCACCA CAGACGACGT TGATGCGGAG GAGCATCGCC GCAACAACGA CCACGACGAC
GTTCGTCCAC ACGTTTCGGT ACACATTCGC GTTTACCAGT TTGTGACGGA ACTCGTTGCG
GGACCGACCA GCGCACCCCA GGTCGAGACG GAAATGGACG TACCGGTAAA TACGGATACT
GCGTCTGCGG GATCACGCAC ATGGATGCAG CTGTCCTGGG TTTGGGTCCT ACTCATCCTC
GCGTGGCACA TCATTTGCTT TCCATTGGCC ATCAATCCAG GCTTGGTCAC GGTATCGTCT
ACGGGCAATT ACCTGACAAC GGTCTATCGA GGTATACTGC AACCGGTCCG ACCGTTTCTC
TGGAACAATC GTCCGAAGCA CAGGCCAAGC TGGCGCAAGC GGTGCAAGGT CTGCAAACCG
TACAACATCA GCAGCTGGCG CGATTGCGCA CCGCGCGGAT CGCGCTGGAA CAAGCCGAGA
ACGCGTTTCG GTCACAACAA CTCGCCGCGG AAGAGAATCT GGCGAGACTG GAACAGAGTT
GGGAGACCGA GGCGTCTTCT GTGATGGAGC GATTGGAGAA AGAGGAAGCA ACGGCTCGGA
CATTGAATCA CTGGATCGAA CAAGTCTTGG TGGAAGTTCC GGACGACGAA GAGGAAGAAG
AATACGTGGA GGCGGTATCT GTGCCGCCCG AAATTCGCAA TGTTCTCGGC CCCACACAAG
ACGCGCTGTT GGACTCTTCG TTCATCACGC TATGGGATGT TCCCGAACCA GTGATTTGCG
AAACACCCGA TGTCAGCGGT CTAGCTGGTG GGCTATACAA GGAAGATGTG GAGCAAGCCA
TTTCGGACCT AATAACAGAT ATTGTACAAG TTGATGAGGA AATGGAAGAA ATGGTCCGAA
AATGGGTGGA AAACTATCTG GACACCAAAG CAGGAGATGC AATGACGACG ACGACCACCG
CCGATGCTAA TATACCGCCA TTGGATGGTG TCGTCGACGC TGATGCATTG AAGAAGCTCC
GCGCGTTCAT TGACGGCCGT ATGGAGGTTG AACGTGCCGA CCAAACTGGC TTAATTGACT
ACGCATCGTT ACTGAATGGT GCTCGGATTA TAAGGGTGGG CGACCGGTCA ACTAGTATGT
CGCTCGTAGA CCAACTACCG GTCTTTAATC GGTTGGCCGC TCTACTTTCG CTTCGCTTTT
ACGGACACGG ACCGGAAGCG GCTCTGCTAC CCACGTATCC ACCCAATGCT CTCGGGCAAT
GTTGGTCCTT TGAGCCACCA GCCAGTAGGC GAAGCGGTCC CTTTGGTGTA TTGACGGTGC
AGCTTTCACG CCCAATTCAC GTGCAGAGTG TTTCTATTGA ACACCCACCA CCCGAACTGA
CGGACAAATC CCAGACAGCA ATCCGGTCCT TTCGTATCGA GGGCTTTGAA GATACGCAAA
CACACGGCAA AGCGCACTCC CTCGGCTCGT TCGAGTACGA CGGCCAGAAA GGTCTGCGTC
AAGATTTCGA TGTAGACCGA AACGTTCCGC GGTTGCAATC CATCAGTTTA GTCGTTGACA
CGAACTGGGG CGAACCGTAC GCTTGTCTCT ACCGGTTCCG AGTACACGGT CAGGAGTAG
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| Protein sequence | MSKRKGEDLP VSPDDFSPPG VKTRSIRKSG KRQRRIQVAE ESDAEPSSPS VAAFQNPPSS
SSSIPTDRQS NNNNNNNNKK DDDDRDDSSD PEDPMEDSNR RRRTNPSKTH DTARRKAPPA
ASGSPKEAGE NVPLSRRLDY RETDTRKESP TTLPTESVLR ERDVLENGHD KTTTDDVDAE
EHRRNNDHDD VRPHVSVHIR VYQFVTELVA GPTSAPQVET EMDVPVNTDT ASAGSRTWMQ
LSWVWVLLIL AWHIICFPLA INPGLVTVSS TGNYLTTVYR AQAKLAQAVQ GLQTVQHQQL
ARLRTARIAL EQAENAFRSQ QLAAEENLAR LEQSWETEAS SVMERLEKEE ATARTLNHWI
EQVLVEVPDD EEEEEYVEAV SVPPEIRNVL GPTQDALLDS SFITLWDVPE PVICETPDVS
GLAGGLYKED VEQAISDLIT DIVQVDEEME EMVRKWVENY LDTKAGDAMT TTTTADANIP
PLDGVVDADA LKKLRAFIDG RMEVERADQT GLIDYASLLN GARIIRVGDR STSMSLVDQL
PVFNRLAALL SLRFYGHGPE AALLPTYPPN ALGQCWSFEP PASRRSGPFG VLTVQLSRPI
HVQSVSIEHP PPELTDKSQT AIRSFRIEGF EDTQTHGKAH SLGSFEYDGQ KGLRQDFDVD
RNVPRLQSIS LVVDTNWGEP YACLYRFRVH GQE
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