Gene PHATR_46901 details

Gene Information

• Locus tag: PHATR_46901
• ID: 7204736
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: +
• Start bp: 753332
• End bp: 755437
• Gene Length: 2106 bp
• Protein Length: 591 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002185779
• Protein GI: 219121096

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AACGCCCATC GTTCCTCTCT TCATCGGAAG ATTCTTCTAA AGCAACTTGG AGAACGAGAG 
AGTCATTTTA ATCGTGGCAC GAACAGTCCT AAATCTCTGA AACAGCAGTT TTTATCCATA 
TTAGCGAAGC TAGCTCCGTT GGACGACGGG TAAAGCCAGT AAACGGGTGG CAATTCCGCC 
AAAGACAAAA ATACAGGCAA CAACGGACCT TCTAACGTCT ATTGCTCTGT TGCAGTAACT 
GTGCTTCCTC CGACTCTTGG TTGTCACGGC AAACCGGACA GAACACTACA TCTGATTCCA 
AAGCCCTACG GCTCCACGAA CGATACAGTC ATGACGGAAA CAACAACCGT AGGCAGCGAT 
GTAAGCAGCG GATCATTCAC AGCGCCCGAT TTGGACTGCA GTGGTGCTTG GATTAAGGAT 
CCAACCTTGT CTGATGTACT TTGTGGACGC GGTGGTTCGA TCAACTCGCA TGCAGGCAAT 
GAGCGATTTC GAGAATTGGT CGAAAAGCGG AAGCGTGTCT ACCTTACCGC ACGCTTCAAG 
AGAGAAAAAC GTCTGATTGC CAGTAGCATC GTTTCGGAAA TTCGAGGGCT AAAGCCTTCG 
GGGAGATTTC TATCAAGAGA TAGTAAGACA GGCTTATGGA AAGATATTGG TGATGAAAAA 
GCTAGGGACA AAACATCGCA AGCGTTACGC GAGAATGCTC CTTCCATCCG CGCCGAGATT 
GAAACGGAGA TCAGCGAGCA GCGCAGGGAT TATCAACAGG AAGATCAGGA GGTAGCACCT 
CACGGTACTT CTCATCCAGG TTATTATGCC CCTCCGACCT GGGGCTTTCC TACTTATGCA 
TACCCCAGTT ATCATCAAGT GCATCCCGCT CCACCGGGCG GAGCCCAACC TCCGCATGGA 
ACTCCAATGC CACCACCTGG CTACTCATAC GATCCACGGG GTCCGCCGCT GCCACCACAG 
CATTACCCTC CACACTATCC GCCGCCAGGC TATTCACGAG ACTCCCACTA TCCGCCACCG 
CACTCACACC ATCACACACC AACTACACAG CCCACTGCAC AAGCTACACC AAAGTCGGCC 
CTCGAAGCCA CTGCGGAGAT CATTACTTCT GGTGCAGAGA CACTTAAGAA GTGGACTCAT 
TCCAATTTAT CATTGACTGG TGTGCCTTCA AACGATGGTC ATGATTCTAG GTCAACAAGT 
TCACGCAGTT CAAAGCCTAT CGCATACGTT CACCAAGATT ACACCAAGAA GCGCCGTATG 
GTTAAGTTCC GAGACGATTA CGACCGTCGA ACAAGCTATT CGCCGGTTTT TTCTGGAAGT 
GCACTCGGGG GAGGCCAAGC GCACAACGAG CAAATCGAAC CTCAAAATTT GCATGATCAA 
GAGAGCTCCC TCATGACACA AGTTGCCGAT CGCATTCTGG GGTCGTTAGG TTCCTGGGAC 
ACTGGTACTT TCTGTGGCGG TCATGATGCA GACGATGAAC GTAAATCGTT CTTTCCGGTA 
TCTCTTTCCA GTAACGCAGG GCCACCGACC CAAGATGAAG ACAACATGGC GGTCGAATGG 
GAAGGTCAAG AAGTACAGCT GGTCGACAAG TCTTTGGAGA GTCAGTCTGT CGCTTCCGAC 
GAACGTATGC CCCCGCCTCT AGTTCGGCAG CAACCACGCC CGGACCAAGC ATCATCGCTC 
GGTGGATTCT CGTCCCTGGG AAGCTGCCAT TCTTGGCTGC TTCCGGAAAG TGCCGCTTCT 
TATTTCAGTA AATCGGGTGC TTCACCCTCG AACTCAGTCG ACATGGGGTA CTCGGCCGTC 
GGCATGGAAC AACATTCAAT CAACGGTTCA ATCGGCGGCG CTTCGCTCAC GCGTGTTTTT 
GAAAACGAGC CTCAGTCTAC GCCTCATTCC CCTGGCATGT CGCTGAGATC GTTGTCTCAA 
ATGCCATCGT GGGAACGGTC CCTGCGTAGC AAATCGCCTC TGTCCATTGC ATCAGACGAG 
GATGATTCAT TGATATCCCG TTCGTCGAGC AAGATATCGG ATGGACACCT TAGTCCGTTC 
CACGCGCCAT CGAGTCCGAT GCCTATGGTG AACGAGGACG ATATGGTGTG GGAAACCAAG 
GAATGA 

 

Protein sequence

MTETTTVGSD VSSGSFTAPD LDCSGAWIKD PTLSDVLCGR GGSINSHAGN ERFRELVEKR 
KRVYLTARFK REKRLIASSI VSEIRGLKPS GRFLSRDSKT GLWKDIGDEK ARDKTSQALR 
ENAPSIRAEI ETEISEQRRD YQQEDQEVAP HGTSHPGYYA PPTWGFPTYA YPSYHQVHPA 
PPGGAQPPHG TPMPPPGYSY DPRGPPLPPQ HYPPHYPPPG YSRDSHYPPP HSHHHTPTTQ 
PTAQATPKSA LEATAEIITS GAETLKKWTH SNLSLTGVPS NDGHDSRSTS SRSSKPIAYV 
HQDYTKKRRM VKFRDDYDRR TSYSPVFSGS ALGGGQAHNE QIEPQNLHDQ ESSLMTQVAD 
RILGSLGSWD TGTFCGGHDA DDERKSFFPV SLSSNAGPPT QDEDNMAVEW EGQEVQLVDK 
SLESQSVASD ERMPPPLVRQ QPRPDQASSL GGFSSLGSCH SWLLPESAAS YFSKSGASPS 
NSVDMGYSAV GMEQHSINGS IGGASLTRVF ENEPQSTPHS PGMSLRSLSQ MPSWERSLRS 
KSPLSIASDE DDSLISRSSS KISDGHLSPF HAPSSPMPMV NEDDMVWETK E