Gene PHATR_46891 details

Gene Information

• Locus tag: PHATR_46891
• ID: 7204438
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: -
• Start bp: 723611
• End bp: 727235
• Gene Length: 3625 bp
• Protein Length: 1007 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002185939
• Protein GI: 219121430

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.861173
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTGTGATCA GCTTGCTAGG TCCGGAGGTC CGTCGTCTTT ACTGCGGACG CGCGGAAACA 
AATTTCGGCA GGCATGCCTG TATCGGTGGC AGTCCAACGG CCAGGCCGCC AGTCGGGATC 
GGCCGACCGC ACCTCCGTCC GGAATCCTCC GACGCTCCCG GGCCGGAAAA AGCACTCGTC 
CGCCGCGTCT CCCACAATGT CGGTCACCAA TCCGGTCGTG GCGTCGCTCC CGAAAAAATC 
CCCGCATCCG TATTCGTCCC TGGCGTTGTC GCCCGATCGA ACGCACGCCG TGACGGCGAG 
CAAGGATACC ATCCAAATTC TGAGGGTCGG TGCGGATGGC CTGTCCCTTC TACAGGCGAT 
CCCGATCGCT CAGCACTTTC AAACCGCCAC TACCGGAGAT CATCGTGCCA TGGGAAGAAT 
ACACGAAGAT GTTCGGGATA GTTTCGCTTC CTTTGGTTTG GGCTCCAAAA CCGCCGCGGC 
TCCCCAACCG AATCTCGCGA TGAACGTCGT CATTACCAGT GTTGCGTGGA GCCATCAGCC 
TACCAAGGGG GTGCCACCCA CCACGGCGTC GGTGTATACG CATACGGAAG GCGCTAGTAA 
AAGTGGGGCG TCGGATAAGG GAGAGCAGAC TCCTCTCGGC GCCAACACTT TCTTGGCGGT 
GGCGGGGTCC AACGGAGTCA TTGTGGTATG GAATGCGGAC GCCTTGTTGC AGGGATCGGG 
GCACGCGACA CCGCACGAAG TTGTACTCAA TCCACACAAT CGTGCCGTCA ATCGTTTGGC 
TTGGCATCCG ACACGACTTT TGCTGCTGTC GGCCTCCCAA GATGGGACGG TAAAGCTCTG 
GGAACGTCGC AAACAATCGA AGCCGCCCCC GGCCCAAGGA AGGAGAGAAT CCAAACAATT 
TAGTCTATTT CGGAGTATGA ATACGACCTC AGCGTCGGTG CAGACGTATT CCTGGTATTG 
TCGTTTAAAC TTTGAGCCGA AGAGTGAAGC CGTTCGGGAT ATTGCGTGGA GCCCTTTTTA 
CGATGATGGT AGGTCAAATA GTTGCGAATG CCTCAGGCTT TGGGAGCTTC CCACCTCAAC 
CACTCTATCG TTCCAGTTTT TGCTCTAGTC ACAACGAGCG GCTCACTCGT CGCTTACAAT 
ATGCACCTAC CCAAGCCAGC CATGCTCAAG ATGACGGCTC ACGCCGGTGA CGCTACTTCT 
ATCGATTGGC ATCCGACGAA ACCGAATATT CTCGCAACGG GAGGGGCTAG TGACCGATGC 
GTCAAGATTT GGGATCTAGT ATCCTACTTA TCCCTCAACA AAGATGAAAA TAACCTTGCC 
GCCAACTACG AAACCGTAAC AAGTCGTGCC GATTCAGTCA ACACAGAGGC TTCTTCCGAC 
ACCGAACGGG GCAGGTGAGT TCTTATGGTA CACCCGGACT GTATTTGTAT CAGTTAGCTA 
CTATGACAGC GAAAATGCTC ACTATGTTGT TGCTTCAACA GTCACACTGT TTCGTTCGGG 
CTCACGTCGT TGTTCCCCAC CGTCCCGCGG TTGACTGGAA CCCTTGGATC CTCCGCCAAT 
TTGGACCGAT CGAGACACAA AAGCCAAACG GACAAGGCCA TGCTTCACGT CTTGTACATT 
TCCGCTTCCG TCACTCGTCT GCGATGGAGG CTGCCAGCAA ACGACAAATT TTTGTTGGAA 
GATGAAGATC GGCACTCGTC TATGTTAGCG GTAGCAACCG CTCCCATCAA AGGTGCAAGC 
GCGGGCTTTC CTGGACTTTT GGGCTTGTGG TCATTTCATA GACCCTTTAT GCCACTTAGC 
GTAGTCGAAG GGCATCGGGA AGGAGCTGTA ATGGACTTTG ATTGGTTGGA TACTCCGCAA 
CCAAAACAAA ATGACACCGG GCGTTCGCTA TCCACAGCGA GAATGTTGTC ATCGATAGAC 
TTGAGAGGGG ATAAACGAGG AGGAAGCTCT CGACTTCAGG GAAGCACAAA CGAAGCAGAT 
TCGACACGTG ATACGGGTGA AGCTGACGAA TATGATAAGC CCATCGGGAT TTGGCAGCAC 
GTAATTAGCG TTGGAAGGGA CGGACGGTGT TTGTTGCAAA GTTTTGTACG CGGTAAGATT 
GTACTCTATC GCAGCAACCG GAGTTCCATT CTGATTTTAA GCCTCACCCA CTTTCCGTAT 
TACAGGAGAC CGACCCATTT CGCGCGTACC ACCGTCCTGC TTTGCTATGG CGAACCTGTC 
TCCTTTTCAG AGGGGATATG GTTCGCTTCA AGTTTTTTCA GTCTGTCAAC AAATTCCCTC 
TGGTCCACGG GAGAATTTCC TAGTAACAGG GCTAAGAAAC GACAGCATCA CAGCTCAGGC 
ACCAGGAGTT TTTCGAGAGC TACCGAGCGA GACATCAGTC GATCCTGCAG CCTTTCTTCT 
GAGAAACCAT TGGATGTCAA AGAAAAGTAT GCCTTCGGAG ACGCCGACAC TGGTCTTCAA 
TGTCTTGGAC CAAGGGGAAC TGGACCACGA GGCCAAGCCA GTGGGGCAGT CACAGCAAGC 
TCTTACGATT GCACCAGAGG TGGTACATCT GTCCCGCTTT GCAGAATCGT ACGTCTTGTA 
TCCCAGCGAA TCCTTTCCTA CTAGGAAGGC TTTGTGTGTG GAGAATGGAG AAATTGCAAT 
GAGTTTGAAT TGTGGCCCAC TTGCGCACAT GTGGCGATTA CTGGCGTCTA TGCTAGAGAG 
CGCCCTCCTG GATGGCCTAC CAGAGAAAGG CTCGGAACCG GGTAACATTA TGCAATTCGT 
TCTTCTGCCA ACAATCAAGG GAATTCTTGA GGAGCGGGCG GACGCTGGTG ATGTGCAGAG 
CTGTGTGGCC TTGTGTGAAG TTTTGGATGT GTTGACGCCG GATCAGACCA CCCGTGTTCC 
CGGTCTCGAG CTAAATCTTG TTCGAGAATG GTATCTCTCG TACATAGATC TGTTGCGAGA 
CATGTGCCTC TTCTCACATG CTTCACTACT TATTCGGAGC TGCAAAGACC CCTTCATTGG 
AGCTTTGAAC CAGCAATCCA CAATGTGAGT TTTGATTTGT TTTGGGGACT GTTGTTTTAG 
GAGAAGACGC TAACTCTTTG CATCGCTAGA ATCTACGAAT CATGTCCAAG CTGCGGTAAG 
CCATTGCAGT CGTCCGAAAG TGGAGGTGCA AGCACATTGG ACGGCACTGT TCGACGTGCT 
TGTAAGAGCT GCCGACGTCG AATCGGTATG TGTTTTCTTT GCCATGAACC TGTAAAAGGG 
ATGTATGTAT GGTGCCCCGG ATGCGGTAAG AATCATTCTT CGTCGTTTGC AACATGGGCA 
AGTCGCTGCT AACACGCTCG CTTGAACTAT ATTAGGTCAC GGCGGTCATA TGGAACATGC 
GCTTCAATGG TTTGGTGGTC TCAGTGGAAA GCCTGTTCGC GAAATGTGTC CCACTGGCTG 
CGGTCACAAA TGTAACATGA TGCAACCGCT CAGCGCCTTT CCAAGAACGG AATCACTTCG 
TGATCTAGCA CAAAGCGACC ATATGGAGAT CATCCCATAG CTCATGCTTC CGCAAATAAA 
AACGTTTTTT CATCGTTGAG TGGAAAAGCG TAGGCATTCT TAGAATAATG TCGAATACCT 
TATGCTTCAG AGTGTTTAAA ACTTG 

 

Protein sequence

MPVSVAVQRP GRQSGSADRT SVRNPPTLPG RKKHSSAASP TMSVTNPVVA SLPKKSPHPY 
SSLALSPDRT HAVTASKDTI QILRVGADGL SLLQAIPIAQ HFQTATTGDH RAMGRIHEDV 
RDSFASFGLG SKTAAAPQPN LAMNVVITSV AWSHQPTKGV PPTTASVYTH TEGASKSGAS 
DKGEQTPLGA NTFLAVAGSN GVIVVWNADA LLQGSGHATP HEVVLNPHNR AVNRLAWHPT 
RLLLLSASQD GTVKLWERRK QSKPPPAQGR RESKQFSLFR SMNTTSASVQ TYSWYCRLNF 
EPKSEAVRDI AWSPFYDDVF ALVTTSGSLV AYNMHLPKPA MLKMTAHAGD ATSIDWHPTK 
PNILATGGAS DRCVKIWDLV SYLSLNKDEN NLAANYETVT SRADSVNTEA SSDTERGSHT 
VSFGLTSLFP TVPRLTGTLG SSANLDRSRH KSQTDKAMLH VLYISASVTR LRWRLPANDK 
FLLEDEDRHS SMLAVATAPI KGASAGFPGL LGLWSFHRPF MPLSVVEGHR EGAVMDFDWL 
DTPQPKQNDT GRSLSTARML SSIDLRGDKR GGSSRLQGST NEADSTRDTG EADEYDKPIG 
IWQHVISVGR DGRCLLQSFV RGDRPISRVP PSCFAMANLS PFQRGYGSLQ VFSVCQQIPS 
GPRENFLVTG LRNDSITAQA PGVFRELPSE TSVDPAAFLL RNHWMSKKSM PSETPTLVFN 
VLDQGELDHE AKPVGQSQQA LTIAPEVVHL SRFAESYVLY PSESFPTRKA LCVENGEIAM 
SLNCGPLAHM WRLLASMLES ALLDGLPEKG SEPGNIMQFV LLPTIKGILE ERADAGDVQS 
CVALCEVLDV LTPDQTTRVP GLELNLVREW YLSYIDLLRD MCLFSHASLL IRSCKDPFIG 
ALNQQSTIIY ESCPSCGKPL QSSESGGAST LDGTVRRACK SCRRRIGHGG HMEHALQWFG 
GLSGKPVREM CPTGCGHKCN MMQPLSAFPR TESLRDLAQS DHMEIIP