| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46872 |
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| Symbol | |
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| ID | 7204427 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | - |
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| Start bp | 675231 |
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| End bp | 677680 |
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| Gene Length | 2450 bp |
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| Protein Length | 670 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185929 |
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| Protein GI | 219121409 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.916479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CGTTGACCGA ACTCAAAAGA CCTGCACGAC AATTTTTTGC AGCAACCACC AAAAACACAA
AGTAGGAAGT ATCCTATCGG ACAAAGGCAA TACTATTCAC CGCATGCAGA GGAACGCTAT
GCATTCTCCC TCCAGATCAT CGCGGACAAC GGTGTCATCC AGAAATCATA GACAGCGGAG
CTGCTGCAGT GTCGCGACGT TCGCCCAGTG CCTCGTGTTC GCTTCGCTAC TCCACCAAGG
TGCGGAAGCG CGCCTTCACG ATGCCGGCAA CCGTTCGAGG CGAGCGTCGG CATCCAACGA
AACGGGTGTC GATCTCGTAG ACGTAGTGAT CGGTTTCGAA AAGGGCGAAG TACAACGCGG
CGGAATCAGT GACTTGGAGT TGCTGGAGCG CGGTGGATTG CTCGGACTCA CCGCAGACGG
CGCGCGTTCG GATTTTCGAC GCACCAATGC CGTGTCGATG CAGATTCCGG CTAGTGAAGT
GAACAGTCTG CGTAGTACGA CGGGAATCTC CTTTGTAGAG TACGATGCCA AGGCTTTTAT
GCACGAAGAT GAGATCGTAA CAACCCGTGC TACTCAGGAA ACTAATCTTC CCTGGGGGCT
CGCAGCGATC CAAGCCAACA GCAAAAAGAT TCCGTTACCC TCACCCAGTA GCGACTGTTT
CAAGATCTGT ATCGTTGATT CAGGTCTTCT TGTGGAACAT CCAGACATTG TAAGTCGGAT
TTGTTTCTTG TCAACAGAAC TTTTTGTTGT TGAAGTTCGA TTGCTCACCA TTGTTTTCTA
TGGCACTCTT TTTTAGCCGT ATACACGAGG AGCTACGAAC ATTGCCGGGG AAGAGTTCAA
CATTGGAGCA CTTAGTAAAT GGGATGAACC TATTGCAATT GCCAACCATG GAACACACGT
TACGGTACGT ACTTTTGTTT GGCCATTGAA ATACTCCAGA TGTGACACGC ACGCTTCGCA
AAAAATCTGA CTCAAAACCT CGTATTGCTG CATTTTCAGG GTACCATGTT GGCTACCGGC
ACTCGCAACC CGAGGGTGGT TGGTGTAATA CCCAACAACC AGAATATTTG TCTGCTCGTG
GCTCGTGTAT TTGGTGACGA AGTCAACCCA GGTGCCTCCA CTTCGACTAC CGATCGTGCG
GCGGAATGGT GTGGAGACAT GGGTGCTAAG GTTATCAACC TTTCCTTCGG TAGCCCCACA
TTTTCGACCA ACTCGGCCGC CATCTACAGA AGCTTGCGAT CCGAAGGAGT TCTGTTGGTT
TCCTCGGCCG GAAATGCACA AGACAATTCC AAGTCGTACC CGGCATCATA CTCGGACGTT
ATTTCCGTTT CATCCGTCGA CAAAGACCTA CAGCGATTCT GGACGTCCCA ACACAACGAC
CAAGTGGACT TGGCCGCCCC CGGAGTCGGC ATTGTATCGA CCGTTCCCGG TATGGGTTTG
TTCGACGAAC TTGGTAGAGA GTACAGCACG GCGCTCATTG ACTACTCTCC TTTTATTACA
TCTCCCCTTA CTGCGGGTGT GGTCCAATGT GGACTAGGCA CAGAGCCGTG CAAGGATGCT
GAAGGGCGGA TCTGTCTAAT ACAAGTTGGT TCCAACGCAA TAGACGACAA GGCTTTTCAT
TGCGAAATGG GTGGCGGCGT TGCAGCCGTT ATTTATAATA CTCAGTTTAC AACCGCTCCG
ACCCGCGGCG CTATTAACAG CTTTGTTTCC ATCCCCGTCA TGGGCGTGAG TTACGCAGAT
GGCCTTGCAT TGTTATCGAA AGAATCTATT ACTGTCGACC TACAAGTCCC AAGCTACACC
GAAAAACGCG GCACCAGCAT GGCCGCCCCG CACGTTGCGG GAGTTGCCGC CAAGATCTGG
GCCGCGCGAC CTGCATGTTC CAATAATCAA GTACGCGACG CTCTGGAAGC TACCGCGAAG
GATCTTGGCG ACCCTGGTCG CGACGACATG TACGGACACG GACTCATCCA AGCGGAAGCC
GCCTACGAAT ATCTTCTTGC CTTGCCAGCC CCTTGCGGAA TTGGCACTAC CGGTACGCCC
AACACGATCC AAGGCTCCGA TAGTGATAGC ACTCCTACGG CAAGTAGCGG TGGGAACACT
CCTACGGCAG GTGGAGGCGG AAGCACCCCT ACCATTGATC GGGAAACCTT TCTGGCAAAC
TTGGCCAAGG AGGGGACCCG ATCACAGGCG AATGATAAGA ATTCTTTGCT CAAGTCCATT
CAAAATAAAA CAGGCCGGGT CCGGGGTGGC GGAGGTGTTC GTCGCCGGTT CCTGAAGGGT
AGCAAGGCGA AACAATAAAA CAAAGCACCG GTGCAACCGT TGCAATTGAC GATTCCGGCA
AAATTTAGGC GCCAGTGTTT TGCCGGAATG TTACCACTTA GCGTCCTCTC TTATTATATC
CATAGATTCT TTCAAGAGGA AATAACACAG TAAGATCATT TTTTCCTCTT
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| Protein sequence | MQRNAMHSPS RSSRTTVSSR NHRQRSCCSV ATFAQCLVFA SLLHQGAEAR LHDAGNRSRR
ASASNETGVD LVDVVIGFEK GEVQRGGISD LELLERGGLL GLTADGARSD FRRTNAVSMQ
IPASEVNSLR STTGISFVEY DAKAFMHEDE IVTTRATQET NLPWGLAAIQ ANSKKIPLPS
PSSDCFKICI VDSGLLVEHP DIPYTRGATN IAGEEFNIGA LSKWDEPIAI ANHGTHVTGT
MLATGTRNPR VVGVIPNNQN ICLLVARVFG DEVNPGASTS TTDRAAEWCG DMGAKVINLS
FGSPTFSTNS AAIYRSLRSE GVLLVSSAGN AQDNSKSYPA SYSDVISVSS VDKDLQRFWT
SQHNDQVDLA APGVGIVSTV PGMGLFDELG REYSTALIDY SPFITSPLTA GVVQCGLGTE
PCKDAEGRIC LIQVGSNAID DKAFHCEMGG GVAAVIYNTQ FTTAPTRGAI NSFVSIPVMG
VSYADGLALL SKESITVDLQ VPSYTEKRGT SMAAPHVAGV AAKIWAARPA CSNNQVRDAL
EATAKDLGDP GRDDMYGHGL IQAEAAYEYL LALPAPCGIG TTGTPNTIQG SDSDSTPTAS
SGGNTPTAGG GGSTPTIDRE TFLANLAKEG TRSQANDKNS LLKSIQNKTG RVRGGGGVRR
RFLKGSKAKQ
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