Gene PHATR_46843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46843 
Symbol 
ID7204694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp603703 
End bp605070 
Gene Length1368 bp 
Protein Length455 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185742 
Protein GI219121021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.190085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACATG TCACTTTCTT CCAGGCATGT CACACTCGAG TGCCAATCTT GACCGATGTC 
ATCAAACCTC TGTTCCGCCG TTACGACGCA GCTTTTTCGG CTTCCAACTC TTTTGTGCTT
TTGCCGAGAA CTGTTGCGCT CGGATCTGTA GCAAATGGCG ACGAATGCTC GCAGCCTTCG
CAAAAAATGG ATGAGAAGCC AGCAAACACG GTGCTTGCAG TTAGCGAAAA CCCAGAGGGC
GTTCAATGGA AACGTCCCGA TGATTCGATG CACGCACATT TCGACTGTTT CTCTGGTGCT
GCGGGTGACA TGATGCTTGC TTCGTGTATC GATGCCGCAG GGGATATCGG TGACCAGCTG
CTGGGATATG TGGGAGAGTC TATACGCCGC GGCTTCCCGG AGCTTGATGG CGAATTCGAG
TTGTATAGGG AACGCGTCTG GAGAGGAATG GGTTCTATCG CTGCCACCAA GATAAACGTG
AGCAGTCTCT ACGGCCACAG AGCTGCACCG ACTCCCAAGC TAACAACAAA AACCATAGAT
GAGCGCGATT ACAAGGCTAC TGAAATGGCG CCGCATACCG ATCATGATAA TTCCGACCCG
TCTTTTAATC AAACTCACCG TCACGTACAC TCTCACGCTC ACGAGCAAGA AGGACACACT
CATCATCTTG AGCACAATAC ATCTGCCAAT CAGCATTCGC ATGATCACGA ACATGTCGGC
GAACATTCGC ATGTACATAG CCATGAAATA CGAAACAGCT ACTCAAAGGA CCATAATCAC
GCGTCAGGAC CACTTCGAAA CCTGCCGCAA ATCCGAGAAA TGCTCCAAAG CTCGTCGGTC
GAATTTATTC CTTTGTGGGT AAGGGACGCC GCGATCGAAG CATTTACCGA GCTCGCCCGT
GCCGAAGCCA CGGTACACGG TGCATCGGGA AAGGACACGG TGTACTTCCA TGAAGTGGGA
GCGGTTGACT CAATTGTCGA CACTGTCGGC ACTCTTCTGG CGTTGCATGC GCTAGGTGTT
GAAAGTGTAT CGTGTAGTCG GTTACCCTTG GGCGAAGGAA CCGTTTGGAC AGACCATGGC
TTGCTTCCTG TACCAGCTCC GGCAACACTT CTTTTGATGG TTGGTATGCC AACAAGTCCT
GGTCCACCAG GTGTTACCGG AGAGCTTGTC ACACCGACAG CCGCAGCTCT TTTGCGTGTG
CTGACGAAAA AAGATGGCAT TTCTTCTATC GCGGGTAGAC CTCCCCGGTT CGTTGTCAAT
TGTGTGGGAA TAGGTGCCGG AACAAAAAAC TTTCGAAAGC ACCCAAACAT TTTGCGTCTT
TTGATTGGTG ACTCCGTAGT GATTGACGAG AGCACAGAAA GGACATAG
 
Protein sequence
MRHVTFFQAC HTRVPILTDV IKPLFRRYDA AFSASNSFVL LPRTVALGSV ANGDECSQPS 
QKMDEKPANT VLAVSENPEG VQWKRPDDSM HAHFDCFSGA AGDMMLASCI DAAGDIGDQL
LGYVGESIRR GFPELDGEFE LYRERVWRGM GSIAATKINV SSLYGHRAAP TPKLTTKTID
ERDYKATEMA PHTDHDNSDP SFNQTHRHVH SHAHEQEGHT HHLEHNTSAN QHSHDHEHVG
EHSHVHSHEI RNSYSKDHNH ASGPLRNLPQ IREMLQSSSV EFIPLWVRDA AIEAFTELAR
AEATVHGASG KDTVYFHEVG AVDSIVDTVG TLLALHALGV ESVSCSRLPL GEGTVWTDHG
LLPVPAPATL LLMVGMPTSP GPPGVTGELV TPTAAALLRV LTKKDGISSI AGRPPRFVVN
CVGIGAGTKN FRKHPNILRL LIGDSVVIDE STERT