| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46830 |
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| Symbol | PTD5a |
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| ID | 7204684 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | + |
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| Start bp | 571988 |
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| End bp | 575819 |
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| Gene Length | 3832 bp |
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| Protein Length | 469 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | delta 5 fatty acid desaturase |
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| Protein accession | XP_002185732 |
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| Protein GI | 219121001 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.243609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCACCGGGAA CGTATCGAAC ACGACATTTG TCGGTGCGGA TCGGGTCACT CGACCCACGG
TTGGGACAAA CAATAGTAAT ATACACAATA CACAAACCCA ACAATCCCAA CAAAGCCAAC
GAACCCAACA AACCCAACAA TCCCAACAAT CCCATCAACA GGAATTGGGT TTCGTCGAGT
CAATAATTGC TAGAATCCAA ACAGACAGAC AGAGACCAAC CGCATCTATT ACAGAATGGC
TCCGGATGCG GATAAGCTTC GACAACGCCA GACGACTGCG GTAGCGAAGC ATAATGCTGC
TACCATATCG ACGCAGGAAC GCCTTTGCAG TCTGTCTTCG CTCAACGGCG AAGAAGTCTG
CATCGACGGA ATCATCTATG ACCTCCAATC ATTCGATCAT CCCGGGGGTG AAACGATCAA
AATGTTTGGT GGCAACGATG TCACTGTACA GTACAAGATG ATTCACCCGT ACCATACCGA
GAAGCATTTG GAAAAGATGA AGCGCGTCGG CAAGGTGACG GATTTCGTCT GCGAGTACGT
ATCGATACGA CACGACACGT TTGCGGTACA GCGTTGGCAT TCCTTCCGTA GCACTCTTTG
TCACTCACCC TTTCGATCTT CTACGCTACG CTACCGTTCG TTAGGTACAA GTTCGATACC
GGATTTGAAC GCGAAATCAA ACGAGAAGTC TTCAAGATTG TGCGACGAGG CAAGGATTTC
GGTACTTTGG GATGGTTCTT CCGTGCGTTT TGCTACATTG CCATTTTCTT CTACCTGCAG
TACCATTGGG TCACCACGGG AACCTCTTGG CTGCTGGCTG TGGCCTACGG AGTCTCCCAA
GCGATGATTG GCATGAATGT CCAACACGAT GCCAACCACG GGGCCACCTC CAAGCGTCCC
TGGGTCAACG ACATGCTAGG CCTCGGTGCG GATTTTATTG GTGGATCCAA GTGGCTCTGG
CAGGAACAAC ACTGGACCCA CCACGCTTAC ACCAATCACG CCGAGATGGA TCCCGATAGC
TTTGGTGCCG AACCAATGCT CCTATTCAAC GACTATCCCT TGGATCATCC CGCTCGTACC
TGGCTACATC GCTTTCAAGC AGTCTTTTAC ATGCCCGTCT TGGCTGGATA CTGGTTGTCC
GCTGTCTTCA ATCCACAAAT TCTTGACCTC CAGCAACGCG GCGCACTTTC CGTCGGTATC
CGTCTCGACA ACGCTTTCAT TCACTCGCGA CGCAAGTATG CGGTTTTCTG GCGGGCCGTG
TACATTGCGG TGAACGTGAT TGCTCCGTTT TACACCAACT CCGGCCTCGA ATGGTCCTGG
CGTGTCTTTG GAAACATTAT GCTCATGGGT GTGGCGGAAT CGCTCGCGCT GGCGGTCCTG
TTTTCGTTGT CGCACAATTT CGAATCCGCC GATCGCGATC CGACCGCCCC ACTGAAAAAG
ACGGGAGAAC CAGTCGACTG GTTCAAGACA CAGGTCGAAA CTTCCTGCAC TTACGGTGGA
TTCCTTTCCG GTTGCTTCAC GGGAGGTCTC AACTTTCAGG TTGAACACCA CTTGTTCCCA
CGCATGAGCA GCGCCTGGTA TCCCTACATT GCCCCCAAGG TCCGCGAAAT TTGCGCCAAA
CACGGCGTGC ACTACGCCTA CTACCCGTGG ATCCACCAAA ACTTTCTCTC CACCGTCCGC
TACATGCACG CGGCCGGGAC CGGTGCCAAC TGGCGCCAGA TGGCCAGAGA AAATCCCTTG
ACCGGACGGG CGTAAAAGTA CACGACACCA CCAAAGGTGG CGTATGGTGA TCTCTAGAGA
ACAGACATAT CCTACTGGAA ATATCGACGT CCAAACAATA ATTTTAAAGA CTATTTTTCT
GCGTACGAGA TAGTCTGCGT TTCCGTGTCG GATGCCTCTA TTTGACCTAG TTCTTTGGTC
CACCGGAGGC AACAGAGATT CGACAAGTCC GGGTCCGGAA GGCCGATTTT CTCGAGTCAC
GATTGCCGAG TTTTCATCTT TCGTCGCATA GATCGATTGC GTCGCCAACG GACCGGAAGC
GTAAGCACCC TCTTCCACAA TCAATCGTAC CTTTTGAAAT CTCGTCGTTT GTTGTTGTTG
AAAGTTTGCC CAGACTCTAT TTGTTGTTGG CAGACAAGCA TGGGTGCTTC TGGGAAACCG
AACGTTGACG CGACCGAGTC GTACCAGAAT GGCAACGGTG ATCGGGAAGA TGTTCGACTG
TTCCCTCCTT CCGCCATTTC CATCGGTAGT AGTTCGGAGC ATCGTCCCGA AGAACGACAA
CGAATTCGCC TGTGTCTCGT TTTGACCCTA TTTTCGGTCT TTTTTGCTCT CACCGCTGTC
TTGGCGGTAT GGAAAGCACA CTTGCAAGCC GAACACCGAG CCTCTACCCA GGCGTCTTAC
CGGGCCGGAC AGGCTTTGAA ACGCCTCAAC CGTAAAAGCT CTCATCAGGC CAAGCACACG
GCGTCGGGTT GTGAAACTAC CGTTTTGTTA ATGAGGCACT GCGAGAAGCA CGGCCCCATG
GCGACTGAAA GTGACGGATC GACGCAGCAC TGTAGTTACA TTGGGCTCGA ACGCTCGTAC
CATCTAGCCG AAATGTTCGG ACCGGGGCGT CGTTATCCCT TCCCCTCGCA CTTGTTTGCC
CTAACTCCTG ATCGAGAAAC GTACATTAAT TTTCGTCAAT GGGAAACTCT GCACCCACTA
TCCGAAAAGT CGGGTACCAT GATCGAAATT GCAACGCATC CGCACCTGGC AAACAACATT
ATTGAACTTT TGCGGAGTGG TACCGTGTGC GGAAAGATCG TGGTTGTTAG TTGGAAACAT
TCGCGAATGC CCGAGTTGGC GACCTTGCTA GGCTGTGGAC CCGACAACGG GTGCCCCGAA
TCATATCCCG ACACGGACTT TGACCAAGTA TGGCAACTTA AGTATGTGTT CCGTCCGGAC
GGAAGCGATT TGCCTAAAGA CCAGGAATCG AAATTGTCAT GGAACAACAG CACGGATGGC
CACGCCCGGG CACGAAGACG GCTCGACGCC AGTATTTCAC ACAGTGGATG GAACGTGTAC
GCGACCGTGA CGAATCAAAG GTTTGATCCG CTTGCCTTTT CTCACCAATC TGGCGACTAT
CCGGAAGGAG GAGCCGCAAG CGGTGGGAGG TGGAAGAAAG ATGCCTTTGA GCTCTAGAAA
AGGGGTTATT TTGGAAAATT TGACACGTTT GAGATCACTT TTGTCTCCAA AAGTAATCGT
CATCTGCTAT GCAACAATTT GTTACTCTTC TCTATATCCA AACAAGACGG CCCGCGCTAG
TCTTCGCATC TCATTCGATT TCTTTTTCCA CGCAGTAATA GTGCTGGCGA ACACTCCGCA
GGACAAGGTG CTCGAGCATT TCGAAAAACA GAACGATTTG TTCCCGGCTT TCCAAGGATT
GTATAGGTCT CGAGCCGTCG AACGATGACC AAGCATGGTG AAGAGCTTGT GCATCGTAAC
GCTTCGTTGA AGCCATATTT CGGAGTTCCG ACAAATACTC CCTGATCCGA ACCATATCTA
CTTCCATCAA GTCCTTTGCT GCCCGATTGC GCTCTTCTTT CTCCTTGGAC GCATCGAGTA
TCAGAGAAAT TTTTCCCCCA ATACCACAAA GCAAGCTTTC CAATCTGCAC GTTGGATCAC
GATACGCAAC GGCGCCTCTC ACAATTGTGT CCATCATAAC AACGGTGTTC TGAATCAGAA
AGCTGCGCGC CACTCGATTC TTCAGATCTT CTTTAAATTG GCCTCTCGCT TCTTCTGCTG
TCCATCGATA AAAGGGATCG TAGCCCAACA TAGGGAACAA TGTTTTGCAG TC
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| Protein sequence | MAPDADKLRQ RQTTAVAKHN AATISTQERL CSLSSLNGEE VCIDGIIYDL QSFDHPGGET
IKMFGGNDVT VQYKMIHPYH TEKHLEKMKR VGKVTDFVCE YKFDTGFERE IKREVFKIVR
RGKDFGTLGW FFRAFCYIAI FFYLQYHWVT TGTSWLLAVA YGVSQAMIGM NVQHDANHGA
TSKRPWVNDM LGLGADFIGG SKWLWQEQHW THHAYTNHAE MDPDSFGAEP MLLFNDYPLD
HPARTWLHRF QAVFYMPVLA GYWLSAVFNP QILDLQQRGA LSVGIRLDNA FIHSRRKYAV
FWRAVYIAVN VIAPFYTNSG LEWSWRVFGN IMLMGVAESL ALAVLFSLSH NFESADRDPT
APLKKTGEPV DWFKTQVETS CTYGGFLSGC FTGGLNFQVE HHLFPRMSSA WYPYIAPKVR
EICAKHGVHY AYYPWIHQNF LSTVRYMHAA GTGANWRQMA RENPLTGRA
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