Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46802 |
Symbol | |
ID | 7204550 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 494763 |
End bp | 496882 |
Gene Length | 2120 bp |
Protein Length | 579 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185717 |
Protein GI | 219120971 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAGGATTTCG TAAGTAGGGT CAAGGAAGAC CATGGAAACG TAGACGGAAA CACTTTTCCT TCGATTTTTT AGATAGTTCC ACAAGACCAT AGAAAACTTC TAGCATCCAG GAACTTATAT TGACCTGACG CAGACGAAAA GCGGGATCGC AATCGGTTTT GCATTTACCG CAATCAGGAG GAGTCCTGTG GCGTTCGGAT CAATCGCACG GCGCCAAGCT TACCGTTGTC GTTTGGGTGC TGGTGGCGCA CGAGGCCCCT CGTCGAATTG CACATTGACG AAACACAATG GCGAGGCAAT TTCGAAGAAC AAATGGTTTG CACGGTCCCC ATACGACGGG TCAGATCAGC GCATGGATTG CCCTGTTGGC AACCTTGGTG CAATTTTTGC TCGTCGTTTC TCCAATACTG CCGTTGGAAG CTTCCATCCC TGTTACAGTT GTCTTTGTGG CCCTCGTGAG TGGTTCCTTT TACTACGGAT ACCTTGCGCA GTTCATTGAT CCAATGGACA AGCACTTGCG TGTACATCTG CAGGAAACGG AACCCGAAAA CGTGGCACCG GCGGTGGCGT GTTGTGGTTG TTGTACTGTA CCGCAATTCC CTTCGCATCA ACACGATACC GAGCAGCCCA TGGCGAACGA AGACATGAAG CAGTGCTGGA TCTGCGATAC GCAGGTATCG ACGCACGCTA TGCACTGTAA ATTTTGCAAT AAATGCGTTG GTCGCTTTGA TCATCACTGC ATGTGTAAGT ACCACCGTGT ATCGATTTGT TTGTACCAGT ACATGGGCGA AGCTCGGAAG CTCACTCGAT CAACTACGAT ACTTGCTGGT CTTACAGGGC TCAATACGTG TATTGGGGAA GCGAATTATC TCTACTTCTT TCGGACAATG GTTTTTGTTT TTGTCATGGA AGTCTACCAC TTGATTGTGC AGCTTGGGCT CTTGATTGAT TCGTTCACCG ACGGTGCGAC GAATCAAAGG GCCACGGATT GGTTTCAAAC CGGAACGGAC ATTCCGGTGC ACGTGTTGCT GATTTTATTT ATTCTGTTCA ATCTGCTGTC GCTCTTTTTG ATCACGCAAT TGCTCCACTT CCATATCGGG CTGCGGCGCA AGCAACTAAC GACCTACCAA TTTATTGTCG AGGATCACAA AGGGCGACGC GAACGTGCCA AACGCGAAGG TCAATTGGAT TCCAACCGAA TTGTTGCCGT GACGGAGGCA CAGGAAAACG GTCAAACCTG TACCGCGTGG AAGTTGCAGT TGGGCGGATT GTGTCGGCAA GCGGGTTGCA CGCAGTGCGA TCCACTGGCT CTGTCACCTC CAGACAAGCC GGAATCGGAA TCATCCGAAG TAAACGCGCC AGAGAATTTC AGTTCCGCTT TGGGAGAAAG GGAAAGCGAG TCTCAGTCGG TTGTGGCAGA AACCCCTTCG ACGGAACAGC CTCCAAGAAT GGAGAATCGC ACCGAAAACG AGGGCGTGGC GTTTTTGAAA ATGAACGGCG TGGAGGATCC CGAGGAAGCA TCGTCGTCTC GGGCTTTGGA GAACGAGTCG AATTTCAGTT CCGCCTTGGG AGAAATGGAA AGCGAGTCTC AGTCGGATGT GGCAGAAGTC CCTTCGACGG AACAGCCACC AAGAATGGAG AATCGCACCG AAAACGAGGG CGTGGCGTTT TTGAAAATGA ACGGCGTGGA GGATCCCGAG GAAGCATCGT CGTCTCGGGC TTTGGAGAAC GAGTCGAATT TCAGTTCCGC GTTGGGAGAA ATGGAAAGCG AGTCTCAGTC GGATGTGGCA GAAGTCCCTT CGACGGAACA GCCTCCAAGA ATGGAGAATC GCACCGAAAG CGCGGGCATG GCGTTTTTGA AAATGAACGG CGTGGAGGAT CCCGAGGAGG CATCGTCGTC GGGGGCTCTG CCAGATGAAA CGATGACCGA CGGCAGCATT GAGCGAACGG AAGCTAATGT CTCAAAAGAC GTCGATGTCG CACCAACCAT TTCTGTTGCG GAGGAATCAG ATTTGGGTAC AAATCCTGCA ACCGGACCAA CCACCGATGT CGACCCGTCA GAGGACGAGG GCATCCGACA AGCTCAACAA AAAGAGCGCG CACAAAGGTA TTTTGCGTAG
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Protein sequence | MARQFRRTNG LHGPHTTGQI SAWIALLATL VQFLLVVSPI LPLEASIPVT VVFVALVSGS FYYGYLAQFI DPMDKHLRVH LQETEPENVA PAVACCGCCT VPQFPSHQHD TEQPMANEDM KQCWICDTQV STHAMHCKFC NKCVGRFDHH CMWLNTCIGE ANYLYFFRTM VFVFVMEVYH LIVQLGLLID SFTDGATNQR ATDWFQTGTD IPVHVLLILF ILFNLLSLFL ITQLLHFHIG LRRKQLTTYQ FIVEDHKGRR ERAKREGQLD SNRIVAVTEA QENGQTCTAW KLQLGGLCRQ AGCTQCDPLA LSPPDKPESE SSEVNAPENF SSALGERESE SQSVVAETPS TEQPPRMENR TENEGVAFLK MNGVEDPEEA SSSRALENES NFSSALGEME SESQSDVAEV PSTEQPPRME NRTENEGVAF LKMNGVEDPE EASSSRALEN ESNFSSALGE MESESQSDVA EVPSTEQPPR MENRTESAGM AFLKMNGVED PEEASSSGAL PDETMTDGSI ERTEANVSKD VDVAPTISVA EESDLGTNPA TGPTTDVDPS EDEGIRQAQQ KERAQRYFA
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