Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46753 |
Symbol | |
ID | 7204523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 367311 |
End bp | 368716 |
Gene Length | 1406 bp |
Protein Length | 405 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185872 |
Protein GI | 219121291 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00406478 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTACCTACCT ACCTTCCCAA CCATCATCCC GCTCATTCTA GAGGTCCACA CTCACTCACT CGTCTACACA TTCTGGGTGT CTGTAGAGTG GGGATGGAGC ATCCGGGCTA CGCTGCGTTA TCAACAGGCT GCTGCTCGGC TCCCCACAAT TGAAACCGTA GTCGCTCCGC GTTCTTCCTT CAGCTAGGAT GGGCCGACTG GAACGTACCG TTGTGCCCAA CCTCCGTCGT TGGCACACGG ATCTACCACG ACGACGAATC GGTAATCACT ACCAGCTCTG TTGTACGCAC CGCAAGACAA CCGTCACTAC ACCGTCCGCG TCCTTCGCGA CTGTCAAAAG CGGACCAGGC GAACCCTGGG ACCAACCTCG ATTGGCCAAA GGCGTCCTCC TCACACTCAC GGCGTGCACA ATCGCGGTGG CCGTGAGTTA CCAAACACGC ATCTGGCGTC AGGAACGGAT CCGCGATTTG CCAGATGCCA GTGATCCAGA TGTATGGAAC GCACACTTTC CCCACCGTCG GCCGACCCAA GTTGTTCAAG TCACACGCCG GTGTGGGCTG ATGGGGTCCA CGCACAGCGT CAAGGCGGAA CTGGATCGTA TACGCGATTG GCATCACCAA AATGGCTACG TCGGCGGACT TGTGCTGCGC GATTTGACCA GGCCGGTGTT CGGCTTCACG GATGATGTAA TGAGTGAGGA AGAAGACTGG ACGTTGGAAG ATATCATTCG TGATCCCACG CGGTTGAATC GACGGGAATG TTATTATCTA TATTACGAAA TTATGGGCAA CGGCGCCATT CAACAGGAAA TATACTGTCG CGGAACAACC CTTTTGGATG ACGTCTTGAC CTGCTTACAG GCATGGATGG TTTACGATGA CGACCTGGGC TGTCGCGTGC ACCGGGGCTT TCGTAATCAA GCCGATCGCA TCTTGAGGGA CGTACTGCCC TTGTTGGCAC CCCGCTCGGA TCGTCGCGCA ACCGTGGAAG TCTGCGGACA TTCATTAGGT GGCGCCGTTG CGGCCATTCT CGCCGTGAAA CTTGGACGCC TGGGGTACCG CGTTACACGT TTGACGACAA TTGGGGAACC GCGATTTTGT GCGTCGGAGC AGGATGCTGA GGTTCTCCTT CCTTGGTTAC CAATCGACAA CTTACGGGTA GAGAGCGATC AAGATTTTGT CCCCTTTTTG CCGCCGTTTG GTGCACACGT GGGAAAGAAA TTGTGGTTTC TCCAGCACGA CGAACTTCCA CGGCTCGTTC CGGCCCAGAC GGCATCGTCG TCACTTGCGT GGACAGACTC GGTATGGACT AACTTTCGAA TGTGGGAAAT TCTGTCGGCC AACGGTAAGC CTCATCGAAT TCCCAGCTAC GTTGATAAAC TTAAACGACG ACTGGTGCCT TCGTAA
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Protein sequence | MGRLERTVVP NLRRWHTDLP RRRIGNHYQL CCTHRKTTVT TPSASFATVK SGPGEPWDQP RLAKGVLLTL TACTIAVAVS YQTRIWRQER IRDLPDASDP DVWNAHFPHR RPTQVVQVTR RCGLMGSTHS VKAELDRIRD WHHQNGYVGG LVLRDLTRPV FGFTDDVMSE EEDWTLEDII RDPTRLNRRE CYYLYYEIMG NGAIQQEIYC RGTTLLDDVL TCLQAWMVYD DDLGCRVHRG FRNQADRILR DVLPLLAPRS DRRATVEVCG HSLGGAVAAI LAVKLGRLGY RVTRLTTIGE PRFCASEQDA EVLLPWLPID NLRVESDQDF VPFLPPFGAH VGKKLWFLQH DELPRLVPAQ TASSSLAWTD SVWTNFRMWE ILSANGKPHR IPSYVDKLKR RLVPS
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