| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46750 |
|---|
| Symbol | |
|---|
| ID | 7204643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011679 |
|---|
| Strand | - |
|---|
| Start bp | 355605 |
|---|
| End bp | 356499 |
|---|
| Gene Length | 895 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185870 |
|---|
| Protein GI | 219121287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCTTATTAGG AACACTTATT GCCAACCTCT AAAAGTGTTT CCAGTCCACC GTTGCAGTTA
TTCCACAGCA ACATAAATTT CACAGTGTGA CTGTGTGGAT TGCTGTGGCC TCATGAGTGC
GGTTGAAATG ACCAAGCCGG CGGAGACCAT GGGGGACGTA GAAACCGGTC AGGGCGGGGT
AGGCGGGCCG CTGAACCTGC CACCTAATCC GGAAACGGGC AAAGGCTTTC TGAAGCCCAT
TCCAGAAACC ACGCCCATGG AAAAAACCAT GGGCATCGTC GGCGGTGCCT GTGTCGTCAC
CGCTCTCGCA GCCATGATTG TGGAGCAGTC CACCATTGTC ATTTTGGGCG GCATACTGTC
ATCCATCGTC GGTCCTTACG CGTACTGGCA GCAAACGCGC TTGACGGATA TCAAGGCCTT
GAAAGAAACA CACGCAGCCA TTCAAGAAGA AGTAGATAGG TTCAGCGACG AAAATCACCG
CTTGTCGTCG AATATTGATC ACCTGACGGG ATCGGTGAAC AATCTCAAGG ACGTCGAGGA
CGCTCTGCAA ATCCTTACGC AGCAACAAGG AAAGTCGGTG AACGCCTTTG CTAAGCAAGT
GCAAGAGAAC AAATCAATAC TAGCGCAAAT GCAAACCAAT CTCAAGGCTA ACGTGTTGCA
GAATCTCTTG TCAGTCATAT TGCGGAGTGA TACCGATCAA GATATGAAGA TTTCCGAAGC
CGAAGTCTCC GATCTCACGA GGCGCATCAA CAACATGGCC GGTGTACGCG TACACGAAAA
CCGTTTCCGA AATGCTATTC AGAACAAGTC GGTCGCCGAT GTCATGGAAG TCGTGAAGAA
CCTTTTAAAC GACAACATAC CGGACAGCGA ACGGATTTTT GAACTCAGCC AGTGA
|
|---|
| Protein sequence | MSAVEMTKPA ETMGDVETGQ GGVGGPLNLP PNPETGKGFL KPIPETTPME KTMGIVGGAC
VVTALAAMIV EQSTIVILGG ILSSIVGPYA YWQQTRLTDI KALKETHAAI QEEVDRFSDE
NHRLSSNIDH LTGSVNNLKD VEDALQILTQ QQGKSVNAFA KQVQENKSIL AQMQTNLKAN
VLQNLLSVIL RSDTDQDMKI SEAEVSDLTR RINNMAGVRV HENRFRNAIQ NKSVADVMEV
VKNLLNDNIP DSERIFELSQ
|
|---|
| |