Gene PHATR_46740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46740 
Symbol 
ID7204516 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp336403 
End bp337689 
Gene Length1287 bp 
Protein Length338 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185865 
Protein GI219121277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CACTGACGGT GACGGTCCAT TTCCAACCAA CCGACACCCT TTCCTTGCCG TACTTGCCTT 
TTGGTAGTGT CCATTTCGTT ACGGATTCGT CGTCGTTGTC GTTGCAGTAG TTGCTATAGT
AGCAGTAGTT GCAACAGTCG TAATTGCAAT GGCAACCGTT AGGTCGTCGA ACCCGAGCGG
CATGGAAGAA ACCACCGTCC ACCCGACGGC TTTGGGGACA ACCGATGCCG CCGCATCCAC
GGACGACCCG TCCGAGTCGT CTCTGCCCGT CGACAAGGGA AGTACTGTAC GGGATGTCGG
CGACAACGCA CGAGAAGATG AACCGGAGGC AGCTTTGCAT GCGGAGACGA CGGAACCAGC
CGCTACCGCC GCCACGGATC CGGACGGTGC CATCCGCACA GTCGCCACGC TGTGTCGGGA
CGACGACCAA GAGTCACACT CTACGGATGC CACCAACTGT ACCACGGTCC TTCCACAAAA
ACCAGTTAAA CGAGCCCGCA CGGCGTATTT CATTTTCGCC GACGACCATC GAGCACGAGT
CCAGAAAGAA GTAAGTTACT GCGGGATGGG ATAGGGGCGG TGCGGCCTCC ATCCCACGAC
TCTTTCTGTT TCCGGATTTC CTGGTGCTGA CCTCGTTTCC TTTCTCTCGA ATTGTTTTCA
CTCCTCCAAC AGCATCCGGG CGAAGGCGTG GCGACACAGG CCAAAGCACT CGGTCACCTT
TGGGCGAACT TACCGGCCGA CGCCAAGTTG GTGTATCAGA ACCAAGCCGC ACAGGAGCGA
GAGCGTGTCG CCCAGCAACT CCAAGCCTGG AAAGACGCCG GAGGTTTGGC GACCGCAACG
ACCAACACTG GCTTGGGTGC CAACTCGTCG TTGTTGGAGT CGTCGTCCCC TGCGAATAAC
AATGCCGATT CCCTCGTGTT TCCCGTGGCC CGCGTACGCA AAATATGCAA ACTCGATACG
GACGTCAAGG GACTTTCGAA AGAAGCCTTG TTGCTCGTCA CCAAGGCCGC CGAACTCTTC
ACGTCGCAGC TCGGGACGGA AACCACCCGC GTCGCGCAGA TACAGAATCG TCGCACACTC
TTACCGGACG ACGTGGCGCA GGTATGTGCC GCCCGCGCCC GCTTTGACTT TTTGCAACCG
GACATTCAGG ATTTGACCCG CCAGCAACAA ACGCAAGCGC GGGTGCATCA GCAAGAAAAG
GCGGCGGCCG CCGGGGAAGT GGCGACCGGC CGCGCCAACG GGAAAAACAT CACGGACTAC
TTTGCGGCGG TCCCGCAACC GGAGTAG
 
Protein sequence
MATVRSSNPS GMEETTVHPT ALGTTDAAAS TDDPSESSLP VDKGSTVRDV GDNAREDEPE 
AALHAETTEP AATAATDPDG AIRTVATLCR DDDQESHSTD ATNCTTVLPQ KPVKRARTAY
FIFADDHRAR VQKEHPGEGV ATQAKALGHL WANLPADAKL VYQNQAAQER ERVAQQLQAW
KDAGGLATAT TNTGLGANSS LLESSSPANN NADSLVFPVA RVRKICKLDT DVKGLSKEAL
LLVTKAAELF TSQLGTETTR VAQIQNRRTL LPDDVAQVCA ARARFDFLQP DIQDLTRQQQ
TQARVHQQEK AAAAGEVATG RANGKNITDY FAAVPQPE