Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46740 |
Symbol | |
ID | 7204516 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 336403 |
End bp | 337689 |
Gene Length | 1287 bp |
Protein Length | 338 aa |
Translation table | |
GC content | 59% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185865 |
Protein GI | 219121277 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CACTGACGGT GACGGTCCAT TTCCAACCAA CCGACACCCT TTCCTTGCCG TACTTGCCTT TTGGTAGTGT CCATTTCGTT ACGGATTCGT CGTCGTTGTC GTTGCAGTAG TTGCTATAGT AGCAGTAGTT GCAACAGTCG TAATTGCAAT GGCAACCGTT AGGTCGTCGA ACCCGAGCGG CATGGAAGAA ACCACCGTCC ACCCGACGGC TTTGGGGACA ACCGATGCCG CCGCATCCAC GGACGACCCG TCCGAGTCGT CTCTGCCCGT CGACAAGGGA AGTACTGTAC GGGATGTCGG CGACAACGCA CGAGAAGATG AACCGGAGGC AGCTTTGCAT GCGGAGACGA CGGAACCAGC CGCTACCGCC GCCACGGATC CGGACGGTGC CATCCGCACA GTCGCCACGC TGTGTCGGGA CGACGACCAA GAGTCACACT CTACGGATGC CACCAACTGT ACCACGGTCC TTCCACAAAA ACCAGTTAAA CGAGCCCGCA CGGCGTATTT CATTTTCGCC GACGACCATC GAGCACGAGT CCAGAAAGAA GTAAGTTACT GCGGGATGGG ATAGGGGCGG TGCGGCCTCC ATCCCACGAC TCTTTCTGTT TCCGGATTTC CTGGTGCTGA CCTCGTTTCC TTTCTCTCGA ATTGTTTTCA CTCCTCCAAC AGCATCCGGG CGAAGGCGTG GCGACACAGG CCAAAGCACT CGGTCACCTT TGGGCGAACT TACCGGCCGA CGCCAAGTTG GTGTATCAGA ACCAAGCCGC ACAGGAGCGA GAGCGTGTCG CCCAGCAACT CCAAGCCTGG AAAGACGCCG GAGGTTTGGC GACCGCAACG ACCAACACTG GCTTGGGTGC CAACTCGTCG TTGTTGGAGT CGTCGTCCCC TGCGAATAAC AATGCCGATT CCCTCGTGTT TCCCGTGGCC CGCGTACGCA AAATATGCAA ACTCGATACG GACGTCAAGG GACTTTCGAA AGAAGCCTTG TTGCTCGTCA CCAAGGCCGC CGAACTCTTC ACGTCGCAGC TCGGGACGGA AACCACCCGC GTCGCGCAGA TACAGAATCG TCGCACACTC TTACCGGACG ACGTGGCGCA GGTATGTGCC GCCCGCGCCC GCTTTGACTT TTTGCAACCG GACATTCAGG ATTTGACCCG CCAGCAACAA ACGCAAGCGC GGGTGCATCA GCAAGAAAAG GCGGCGGCCG CCGGGGAAGT GGCGACCGGC CGCGCCAACG GGAAAAACAT CACGGACTAC TTTGCGGCGG TCCCGCAACC GGAGTAG
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Protein sequence | MATVRSSNPS GMEETTVHPT ALGTTDAAAS TDDPSESSLP VDKGSTVRDV GDNAREDEPE AALHAETTEP AATAATDPDG AIRTVATLCR DDDQESHSTD ATNCTTVLPQ KPVKRARTAY FIFADDHRAR VQKEHPGEGV ATQAKALGHL WANLPADAKL VYQNQAAQER ERVAQQLQAW KDAGGLATAT TNTGLGANSS LLESSSPANN NADSLVFPVA RVRKICKLDT DVKGLSKEAL LLVTKAAELF TSQLGTETTR VAQIQNRRTL LPDDVAQVCA ARARFDFLQP DIQDLTRQQQ TQARVHQQEK AAAAGEVATG RANGKNITDY FAAVPQPE
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