Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46707 |
Symbol | |
ID | 7204618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | - |
Start bp | 246972 |
End bp | 247862 |
Gene Length | 891 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185848 |
Protein GI | 219121241 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.125621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ACAGATTAAA ACAAATTCTG TCTCCGCTAA CCATAGCAAA GAAATTTTCT CGACCGACAG CAGCTATGGC TTCTCCACTG GATATGCAGA AGATAATTCC GCTCATCACT GGCGGTGGTA GCGGCATCGG CCTCGGTCTC GTCAAGCAAT TCCTCAAGCG TGGCTCGCCG AAACTTCTGA TCACGGGCCG TCGCGAAGAA GTCCTACAGT CCGCAGCCGG TGAGTTTCCC GAACAGATAT TCTACAGAGT CAGCGATGCC GGAGCGGTAC AGGACCGGGA AGACCTATTG ACATGGGTCC AAACCGAGCA TCCAGATTGT AACGCTCTCG TCAACAACGC TGGCGTGCAA CGCCAGTTTC CCCTCCACAA GGATGATGCG GCTTGGCACG AGCGCGCACA CGAGATTGAA ATCAACTTAC ATGGCCCTGT TCATCTATGC TCACTCTTTA CTCCCTACCT ACTCGCAAAG CAGAAAGAAA CAACACTCTT GGCCAATGTT TCGAGTGGAC TCGCGTTCGT CCCCTACCCT AATGCACCGG TATACTGCGC TACCAAGGCC GCTCTACACA GTTACACCAT GTCTTTGCGT TACGCTCTGA GTGAGACTAA TGTTCGTGTA GTGGAGATCA TCCCTCCAGC CGTCAAGAGC AACCTCGGAG GAGCGCACGA CTTTGGTGAG GATTTGGACC AATACGTTGA GGCGACGATG AAGCGTGTCC AAGCCGGCGA AATCGAAGTT GGTTACAAGT TTTCCGAGAC GGCGCGGATG GCGGATCGTG CTCAATTGAA TGGAATGATG GATCACTTGG CTACCGCCAT GCAGGTTCCA AAGTACGCGG TTGAGTAAAT TGAACGGATG CATGATTTAT CGTCATGCCG TGGACATACT A
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Protein sequence | MASPLDMQKI IPLITGGGSG IGLGLVKQFL KRGSPKLLIT GRREEVLQSA AGEFPEQIFY RVSDAGAVQD REDLLTWVQT EHPDCNALVN NAGVQRQFPL HKDDAAWHER AHEIEINLHG PVHLCSLFTP YLLAKQKETT LLANVSSGLA FVPYPNAPVY CATKAALHSY TMSLRYALSE TNVRVVEIIP PAVKSNLGGA HDFGEDLDQY VEATMKRVQA GEIEVGYKFS ETARMADRAQ LNGMMDHLAT AMQVPKYAVE
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