| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46641 |
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| Symbol | |
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| ID | 7204570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | - |
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| Start bp | 57925 |
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| End bp | 61245 |
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| Gene Length | 3321 bp |
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| Protein Length | 1036 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185815 |
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| Protein GI | 219121172 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.335573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AATTCCAGGA ATCATCCTCA CTGTCAGCAC AACATCTTGG TTTTCATAGT AAACCTTTGT
ATCCGACTAA TGTAGCAGCG GTCGTGCACT ATACGTGTCT CCAGAAGCTG CAACATGGAA
CAAGGGAGTA CGTGCAACAG CTCAGCACCA GCAGAGACAG CGGCGGCGCC GTGGCTGACC
TGCTTTCACG ATACTATGAT TATCTTTCCA AGAAACGTTG TCCGATCGAC GGTATCACGA
TGGAAGCTGC CGTATTCGAC TACGCTTTTT GGTGCTTGTA GCAATATTGG GTACATCGCG
TTTCGTTGCG AGTCTTCTAA AGATGTGATA CCGCTGGTAC TGCTGATACT GTTTATCGCA
ATAGCCTCGG TTTTACCAAA GTGCTATCGA AAGCGCTGCA AAGAAACAGT ACCGACAACA
TTGCACGATC AATGGACACT TTCTTCAACC ACACAGCGCA CAACGTGCGT TCCCGACGTC
GTTGACCAAC CCCAACACGA GCAACACTTT TACCTGAATC AACTCCGGCG CAAACGAGAC
TTTCTGGCCC GTGCCGGAGA CGATTACGGC TATCGCAACT CACCCGCAGG GTTTATTGAC
GATTGGAGAG ACTTCGAATT TCCTCTCCTG ATATCTCCTA TCCGGCTGGA TAGCAAAGTT
CCCTTCACAG AGCCAGGTCC TGCCGTGTCC AAAAATACTA AATGCGGTCC GAATCCCAGT
CCTGACGATA ATACTTGTGA ACAGCAGGTC TACGCAGATT ACGCGGGTGC CGCCTTGCCA
ACACGATCCC AATGGAAAGC TACCACCAAC GAGACAGATT CGCCTCTACT GTTGGCTAAT
CCTCATTCCA CGGGGCCCTC TGCTGGACAC ACATCCCTTC TGATCGAGCA AGCAAAAAAA
AGAATTCTCG AGTTCTTTTC TGCCACTCCT GGACAGTTCG GTGGCCCACT ATCGAGCCGA
GCTCTCCCGG ACACCACCGG CATTAGTAGA AAAGAAAACC AGCAGTATCC GCAACGACAA
GAGACATTTC ATCCCGGCTA CGAGATTGTT TTCACATCCA ATGCGACCGA CGCGCTTCGC
ATTGTTGCCG AAAGGTTTCC CTGGAAGACA GCGAAATCAA CGTCTTGTCA ATGTCAATGC
CAGCAAGCGT CAACCCTAGT TTACCCACAA GATTCACACA CGTCTGTGGT AGGAATGCGC
GGACCAGTCC TACAGAAAGG TGGCCGCTTG ATGTGCAGGC CAGCGACCGA CTTGCTGTTG
GATATGGACA AGCCACAAGG TGTACGCACA TGGAGTAGTC TCCCCAATGA AGGGCTCCGG
GAAAGTCACC CGTGCAATTG CTGCAAGAAT GAGGTGACAA ATCATTTGTT AGTATTGGCT
GCCGAATGCA ACTTTAGTGG CGACCGGAAG AATGTGAAAC GCGCATTTCG ACGAGTACGC
GAAAGCTCGA ATGCTATAGA GACGAGTGAT CGCTGGTTTA CCATGCTCGA CATGGCCAAG
GCCGCCAGTT CAGCTCCAAT CAACTTACGT TCCCTTGATC CAGATTTTGC CTGCGTCTCC
TTTTACAAAT TGTTTGGAAT GCCGACGGGG TTAGGGTGCT TGTTGGTCAA GCGAGGAGCG
GCTGTGGAGC TTTTGAAGGA GAATCAGAAT ATATATTTTG GCGGGGGTTC TGTGGATGTT
TTGCTACCAA GCACCGACTT TGTGGTGCAT CGATCTGGGC CAACATCTTT GGCGTCTCTT
ACAAATGGTA CTGTTCACTT TCGCGGCATA GCCTCCTTGG TTCACGGGTT TGATGCCCTG
GCCCATGTTG GAGGAATGCA TTCCATTGAA GGTCACACTG TCACTCTAGC TAGAGAATTT
GCTAGTCGAA TCAGCGCAAT GCAACACGCG AACTGCCGAC CATTGGTGGA GATACACAGT
TCATGGGCTA AGGCAGGAAA AGCTCTTCGT CATGGACCCA CGGTAACCTT CAACGTGCTG
CGTAGCGATG GAGCGTACGT GGGCTTCAAC GAAGTCTCTA AACTGGCAGC ATTAAATCGA
CCACCCATAC AGATGAGAAC AGGATGTTTC TGTAATCCTG GTGCCTGTCA GCTTGCTCTA
GGACTCAGTG ACAATGATGT CCGGCATAAT TACGAAGCTT CCGGTCACGT TTGTGGTGAC
CAAATGGATG TAATCAACGG TCGACCTACA GGAGCGATCC GTGTCAGCTT TGGCAAAGAT
AGTATCTGGG AGGATGCGGA CGCAATCGTC ACTTTTCTGG AGCGGATCTT CGTATCGGTT
CAAAGTTTGG ACAATAAGTC CAATGTTGGC TGGGATGCCT CGCCTCGTCG GGTCATGCTG
TCCGAAATGT ACATTTTTCC AATTAAAAGT TGCGCCGCCT TTCGTGTGAA ACGGTGGAAA
TTTGACGCCA TAAGTACGAA ACCCGATTTT GATCGAGAAT TTGCCTTGGT CGATTCGTCT
GGAACAGCCA TGCGCCTCCA ATCCTACCCC AAAATGGCAT ACATACAGCC GCATATTGAT
GTATCGCGAC GTGTAATGAC CGTTCATGCC CCCGGGCAGT CACCGTTGGA GCTTCACTTG
GACACGGATT CTTCGAACAC GATCGAGATT GACAGCGTCG TGAAGATTTG CGGCAACCGT
TGCGGAGCTC GCGTTTGGGG GGATTGTAGT GTCTCAGAGT GGTTCAGCTC CTTCCTTGGT
GTCCAGTGTT GGTTGGCCCG TCATTCTGTC TATGGAAACC AACAAGTTTC GAGCAAATAT
GCTGTTCCGT CAACAGCAGC AAGACGTCAA AGTGTAGCTT TTGCAAACGA GCAACCCATT
TTGCTGATAT CTGAGCACGC AGTTGATACT CTAAATGAGT CTCTGAGGGC ACAGCACCAA
AAGCAAGTCA GCTCCAGGCA TTTCCGGCCC AATATGGTGG TCAGGCTAGT CGGGCAACAA
TTTCAGAACG ACGCTCTTCA TGCCGAAGAC GCCTGGAGCA CAATACAGAA TAATTCCAAG
GAGATTGTCT TTGACGTTGT CGGACCATGC GCTCGTTGCT CGATGGTAGA TGTGGACCCA
TCCTCAGGAA TGAAAGGAAA CACGCTGCGT GCGCTTGCCG AGTATCGACG CCAAAACGGA
CAGATCATTT TTGGAATCTT CCTCAAGGGT AGAACTGCTC GCTCAGAGTC TGAGAAGCGA
GCCGACATGT GGCTGGAGGA AGGGGATTTT TTCCTTTCCG AATGAAGTTT GGAAAAGGGC
TATTGTGTAG CTGTTTGTGC ACCGTAACAA CGAAATCGGT TCCTACTTTA ATTAATGTAA
CATGTTATTG CTTTACATTC A
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| Protein sequence | MEQGSTCNSS APAETAAAPW LTCFHDTMII FPRNVVRSTV SRWKLPYSTT LFGACSNIGY
IAFRCESSKD VIPLVLLILF IAIASVLPKC YRKRCKETVP TTLHDQWTLS STTQRTTCVP
DVVDQPQHEQ HFYLNQLRRK RDFLARAGDD YGYRNSPAGF IDDWRDFEFP LLISPIRLDS
KVPFTEPGPA VSKNTKCGPN PSPDDNTCEQ QVYADYAGAA LPTRSQWKAT TNETDSPLLL
ANPHSTGPSA GHTSLLIEQA KKRILEFFSA TPGQFGGPLS SRALPDTTGI SRKENQQYPQ
RQETFHPGYE IVFTSNATDA LRIVAERFPW KTAKSTSCQC QCQQASTLVY PQDSHTSVVG
MRGPVLQKGG RLMCRPATDL LLDMDKPQGV RTWSSLPNEG LRESHPCNCC KNEVTNHLLV
LAAECNFSGD RKNVKRAFRR VRESSNAIET SDRWFTMLDM AKAASSAPIN LRSLDPDFAC
VSFYKLFGMP TGLGCLLVKR GAAVELLKEN QNIYFGGGSV DVLLPSTDFV VHRSGPTSLA
SLTNGTVHFR GIASLVHGFD ALAHVGGMHS IEGHTVTLAR EFASRISAMQ HANCRPLVEI
HSSWAKAGKA LRHGPTVTFN VLRSDGAYVG FNEVSKLAAL NRPPIQMRTG CFCNPGACQL
ALGLSDNDVR HNYEASGHVC GDQMDVINGR PTGAIRVSFG KDSIWEDADA IVTFLERIFV
SVQSLDNKSN VGWDASPRRV MLSEMYIFPI KSCAAFRVKR WKFDAISTKP DFDREFALVD
SSGTAMRLQS YPKMAYIQPH IDVSRRVMTV HAPGQSPLEL HLDTDSSNTI EIDSVVKICG
NRCGARVWGD CSVSEWFSSF LGVQCWLARH SVYGNQQVSS KYAVPSTAAR RQSVAFANEQ
PILLISEHAV DTLNESLRAQ HQKQVSSRHF RPNMVVRLVG QQFQNDALHA EDAWSTIQNN
SKEIVFDVVG PCARCSMVDV DPSSGMKGNT LRALAEYRRQ NGQIIFGIFL KGRTARSESE
KRADMWLEEG DFFLSE
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