| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46639 |
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| Symbol | |
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| ID | 7204479 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | + |
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| Start bp | 51483 |
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| End bp | 56233 |
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| Gene Length | 4751 bp |
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| Protein Length | 1392 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185616 |
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| Protein GI | 219120769 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGCGT TTGTCTCTAT TTGTGTCAAA AGAGCTGACA ATATATTGAC TGCGACAGCA
AGCTCCTGCT CGAGACACTT TGGCGTGCCA CAGGCTCTCA ATCGTTGGCG ACCTACACAA
TCGACCGTTC AAGGTAACAA GGACGACGCT TTCCCTGCTC AATTTTCGGT GTGTCGCGCT
CTTTCGAAGC TCTAAGAATT GCTTGCATCA GCTCAATTAA CACATCCCGC AAGCACTCAC
TGTCAACGAT CTCCGTAACC GCTCCGCCGG TGGCAGCGAA TCACAAACCT CGTGGAGCTC
CTTTTCATTG CCTCGCTTAT CACAGACACA ATCAATCCAC GTTGGTCGCG AAAGTGGATA
GATACCTTTC CTCGTTTCAC TTGTTCATCA TGACAACATT GGAAACTATT GGCTTTACAG
TTGCCGGTGG TGCCGTGATG CTTGTCACTT CAATGGGGCT GTTTGGATTG GCTGTACGTG
TTCGGCATCC TTTTATTGCG CCGCGCGCCA CAGCAAGGCC CCGCGATGTC ATTCACAATC
CCCGCCCCAA ACACAAGAGC CAAAACCGAG GGAACGCTTT CTTTGGATGG ATTGGCTGGA
CACTCGGTTT GAGCTACGAT ACCATGCTAC GCGGAGTACC CGGGACTGGT ACAAGAGGAA
ATGGCATGTC GGGGAGCATG TTACGTGTCA ATCTAGATGG TATTGTGCTA CTGCGCTTTC
ACGCATTGTG TCTGCGACTC ACCGCGTTGG CAACCGTTCT ACTTGTCTTG TTTATACTTC
CCTTGTACCT GTCGGCGCAA TGCTATCGAA TAGATCCGGA GGAAGCTTTG GGCCAAGCCG
AATGTGCCAG TACGGTGTAC AATCTGACCA ATTATGAACA AACAACAATT GCAAACGTTC
CTTCTCTTTC AGGATCTCGC TTTTGGTCAA CCATTGTTCA TCCGGATCAC AGCGGTGTCT
TGTTACGACT CTACGCTGTC GTCATTGTCT TCCTCATTAT GACGGGATAT TTGCTACATC
TCCTCTATCA GGAGTGGATT CACGTGTTGG CGTTGCGGCG TGTATACTAT CTTGAGTATG
ACGTTTGGGG TGAACGCAGG GAAGAACTTA AGCAAACTCT CTTGTTTGAT GAGATTTCCA
AGCAAAAACG GAAAAACATG AAGCGCTTTA CGTTTAGCGA GCCCGACGAG TTAACGGAAG
AATCTCGCCG CAATCATTTT GAGACTGCTG AAAAGCACTT AACGGTCCGT GATCCGTGGA
TTCCGCACCC CGAGCAGCGC GACACAGTTC CGAATGTGTC GCTATATTCC GTGCTAGTAG
GTGGGCTCCC TTCGTTGCCT GATTACGCTG CTGATACCAT TGATACGGAA GCAACTATCA
GCTTTTCGAG GCGGGAAAGT ATGGATTGGC AGCTTTCGTT GACAAGTACC TTCTTTGACC
ATTGCGTCCC GAATCAACCG GGATTTAGTT CCTCTGTGGC GGCCGTCACA ATTATTCCAG
GGGCGAAAGA CTTGTCTTTG GCTTGGAAGA AATGGTACCA AGCTGCGGGC AAATTGCGTC
GATTGAAATT TATACGAAAT CAAATTGCCG AGCGTCGGCA TTACGACATT CAAGTCGGAG
ATGAGGAAGA AGGGCTGGCC AAAAATGGAC GAATTTCATC AGTTCGATTC AACCTGAGCC
CTGGCGGACA ATCGGCTGAT GAAGAAGGCG ACGAAACGCC GCGGGAGATA TATGCTGAAG
AGGGCAAGAA TCACGATTAT TATCGCGAGG TGCTTGGATC ACTAGTGGAA CAAGAGGTGG
AATCGCACAT TTTTGAAGCG ATGCACTTTG GACCGGAACA GACGGCTGTA TATAGTCGAG
AGTTTGCTCA ATCGGCGGCT CCGTGTTGCC CAAATGGTTG CTTCGAAGGT CGAATCCGGA
ATGCTAGCAT AGATGACTTA CTCGAAATGG AACGATACGC TGCATCTCAA CTGCACAAAG
CCAATCTAGA GCTTCGCGAA GCTCGAAGCA GGGCTACTCG TGCCCACGCA GAATTCCCTA
TAGAAGACGC TGCGGAACTT GAACCTGTTG GTTCAGTAAA TCCTATTCTT CCAGATAGTC
TGCCGCCTTC GGAAAGGAGC AAACTGCGGC GCAATGTTAG TCTGGAGAAA GCTAAAATGC
CGAGCGATTT ACATCTGGAA TCTGAGTTGT ATCAAAAGAC GGCGGTATCC TTTGGAAGCG
CTGACGGAAA AACTCGACTA CGACCGAAAC CCATCGTGGC TAAGGCGCAA CCTTCAAGTG
AACTTAAGGC GGATTATGAA TTGCGCACAA AACGAAAAAC TACGGAAAGG GAAGACGGGT
CACCTCGCAA CTCAAAGCCA CCGCCGATGA AGTCGATACA TGAGGTTCCA AATGATTCTA
ATGTACATCC TTGCAGAACC GACTGGAAAT CCCGGCCGCA TGATTTGGTG GATCAGATGA
CTTTTGGACA CAACGAATTA AAGGGAAGAA CATCGGCCCA AGTGGCCCCA TGGGCAAAGG
TTCAATCCAT TGTGTCAGAA ATGAGAAGTA GCTCTAGCGA AGGGAGCGGT CGTAATAGGC
ACGTACGGGG CAACCGGATG CCTTCCGGAG TTTGGGAGTG GCCTACGTTT CTCAGCTTAT
TTGGTCAGAC AAAGGAAAAG GCCAGTACAA TTACCACTTG GGCAAAGAAG CAGTCTGCCG
CCGCCATCGA TGATATATCT CGTGAATCAA CGTATGCAGT AATCACGTTT ACGTCTCGTC
AAGCTGCGGT TGCCGCGCGC CAATGTCTGG CCGATGGTCG TGCAGCTGAT CGATGGGTGA
GCTTGGCAAG CATTCCAATT CCTCCCTTGG CAGATGCCGC GTCATGTGAT TTGTTGGTGT
GCCGAAACTG TTGTCGTCCT GTCACACTAA GCATCAACGA CCGACAAAAG AATGTCCGAA
ATTACGCGTA CGTTCTCCAC ATTGCTTTGC TGCCATACAT TTACAAGTAA CTCACATGTG
GTTTTTGATT GTTAGAGCAC TGGCAATGTT GGCTGCAATT TATTCGCTCT ACACAATTCC
TTTGACCCTT GCTTCGACTT TACTAGATCC AAGTAATCTC CAAGAAGTTT TTCCGATTCT
TGCCGAGTGG TCTGACCGTG ACAAATTTGG AGTAACAAAG CTTATTTCCG GTTTGCTGTC
TGCTTTGATA TGGACGACAT TTTTCGCCTT ATGTCCGATT ATGTTCAAAT CCATTGCCAA
CTTTGGTTCA AAAGCTACAA GTGTAGCTCA GGCGGAATTC AAAGCCCTCC AGTATTTTTG
GTGGTTTATG GTATTGACGG CGTTCACTGG GCAACTTTTG GCGCAGATGG TGCTTTACGG
TTTCAACGAT GGCCTTCAAT TTGGTACTGA ATTTACTAGC ATTCTACGTG CCGTCGCGTT
GTCCATTCCT TCAGGACTTT CAGCAAGTTG GCTGAACTGG ATCATCGTTC GTTGCATGAT
CATCCTACCT CTGAATTACT TGCTTCAAGT CAACACTTTC CTTTTTCACT ACTTCGGTAT
GCCATGTTGC GCTAGGGTTG TTCGAGGAGG AGGTCCCGGA GGGCCGACGC CCTACAGGAT
ATATGTGGAC TCTGGAGTTG TATTGATGTG CACTCTTGCT CTAGCTCCAG CATCACCTCT
TGTGGCGCCT GCATGCTTTT TCTATTTTCT ATTTTGTCAG CCGGTGCTTC GCCGCAATGC
TCTCTTTATG TATCGTCCGA AATACGACGG CGGCGGATTA CGCTTTCCGT TCATATTCGA
CATGGCGATA TCTGCGTTAG TAGTCGGCCA GGTACTTCTG TGTACAAGCA TGGCTCTCAA
GCAGGCGCTT GGTCCAGCAA TTCTCGCTGC CGTCCCGATT GTTCCAACGA TTTTGTTTTC
GCGTAATACG AAAAAGAAGT TTTTGAGGGC TTATCAGGAT GCTGCCCTGC TTCAAACTTC
ATTACTGGAT GGATGGAACA CTGCAGAGGA AACATCAGAG AAGGAGCGAC AGGAATTTCG
AAAGTTTCTA GTTGATGCAC ACAAGGCGGC CTATGTTCCA GTTTGTATAG CAGGCGCAGA
GGATGAGGAC AGCTTCTTGA CCGCAGAACC GGCCGTAGTA GTACCATTAG AGTCAGAGCT
TGCCGACGCT GGGGCTTTGG AATTTGTTGA GGAGGCTTTA AACGCCACAC CTTCACAATC
GCACGAATCT GAAAACTCGC CTGCAGTTCA GGTGCAAGAG AATCGACCAA AATTGGATCG
CCGCGCGTCG CAACATGGTG CAACTTTGCG CAGAGCTGTC CACACATTGT CTGCTTTGCG
ACAACGACGA GATTCTTCCA CGGGCTCTGA GAACGTGAGC TCTTCTATAG CAGATGAAAG
GTTGATGACA CATTCAGATG ATAGGATCCC CCCTTCGGAA GAGATGGAAG TGCCTTCATC
CATTCGTCGA AACCGACAGC AGAAGTTTCA GGAACAGCAG AATAAAGGAG ATTAAGAACA
GTTTTACATA GTGTAACAAA TCCTCTAGCG CTGTACATTA TTCAGAACCT TGCACGACTT
CCGAAAAGCT CGATTGCCGG ATTTTGACGA GGTTAAGCTG GCCCCACTCA TCCACAAAAG
TCTCGTCTAA GATATCACCC GGTTTAATTT TTTGGAAAAT ATCCATTCCT TCCGTAATGT
AGCCAAATGG AGCGTATTCA CCGTCTAGAA GGCTGCGCTT GTCGTCAATC ACACTGTCGG
CCTGCAATGC G
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| Protein sequence | MCAFVSICVK RADNILTATA SSCSRHFGVP QALNRWRPTQ STVQGNKDDA FPAQFSHSLS
TISVTAPPVA ANHKPRGAPF HCLAYHRHNQ STLVAKVDRY LSSFHLFIMT TLETIGFTVA
GGAVMLVTSM GLFGLAVRVR HPFIAPRATA RPRDVIHNPR PKHKSQNRGN AFFGWIGWTL
GLSYDTMLRG VPGTGTRGNG MSGSMLRVNL DGIVLLRFHA LCLRLTALAT VLLVLFILPL
YLSAQCYRID PEEALGQAEC ASTVYNLTNY EQTTIANVPS LSGSRFWSTI VHPDHSGVLL
RLYAVVIVFL IMTGYLLHLL YQEWIHVLAL RRVYYLEYDV WGERREELKQ TLLFDEISKQ
KRKNMKRFTF SEPDELTEES RRNHFETAEK HLTVRDPWIP HPEQRDTVPN VSLYSVLVGG
LPSLPDYAAD TIDTEATISF SRRESMDWQL SLTSTFFDHC VPNQPGFSSS VAAVTIIPGA
KDLSLAWKKW YQAAGKLRRL KFIRNQIAER RHYDIQVGDE EEGLAKNGRI SSVRFNLSPG
GQSADEEGDE TPREIYAEEG KNHDYYREVL GSLVEQEVES HIFEAMHFGP EQTAVYSREF
AQSAAPCCPN GCFEGRIRNA SIDDLLEMER YAASQLHKAN LELREARSRA TRAHAEFPIE
DAAELEPVGS VNPILPDSLP PSERSKLRRN VSLEKAKMPS DLHLESELYQ KTAVSFGSAD
GKTRLRPKPI VAKAQPSSEL KADYELRTKR KTTEREDGSP RNSKPPPMKS IHEVPNDSNV
HPCRTDWKSR PHDLVDQMTF GHNELKGRTS AQVAPWAKVQ SIVSEMRSSS SEGSGRNRHV
RGNRMPSGVW EWPTFLSLFG QTKEKASTIT TWAKKQSAAA IDDISRESTY AVITFTSRQA
AVAARQCLAD GRAADRWVSL ASIPIPPLAD AASCDLLVCR NCCRPVTLSI NDRQKNVRNY
AALAMLAAIY SLYTIPLTLA STLLDPSNLQ EVFPILAEWS DRDKFGVTKL ISGLLSALIW
TTFFALCPIM FKSIANFGSK ATSVAQAEFK ALQYFWWFMV LTAFTGQLLA QMVLYGFNDG
LQFGTEFTSI LRAVALSIPS GLSASWLNWI IVRCMIILPL NYLLQVNTFL FHYFGMPCCA
RVVRGGGPGG PTPYRIYVDS GVVLMCTLAL APASPLVAPA CFFYFLFCQP VLRRNALFMY
RPKYDGGGLR FPFIFDMAIS ALVVGQVLLC TSMALKQALG PAILAAVPIV PTILFSRNTK
KKFLRAYQDA ALLQTSLLDG WNTAEETSEK ERQEFRKFLV DAHKAAYVPV CIAGAEDEDS
FLTAEPAVVV PLESELADAG ALEFVEEALN ATPSQSHESE NSPAVQVQEN RPKLDRRASQ
HGATLRRAQM KG
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