Gene PHATR_46636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46636 
Symbol 
ID7204478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp45144 
End bp46036 
Gene Length893 bp 
Protein Length250 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185615 
Protein GI219120767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGATATTACC TCACACGAAT AAGGTCCGAC GCACCCTTCT CCAGCTTGGA CCACTACGCT 
GCCTTGCCGT CTTTTTCGGC GATTACCACG AGATTATGAC GACGTCGCAA GAAGATGAAC
CGTTACTGAA CCCTCAAATC GCTGCCGCGG CGGCGGTTTC CGGTGCCGGC TTTATTAATT
CGTCTACCGA AAAGATCAAA AAGGCGCGAG CGGAAGGGCC GTTGACGTTT CGCACGCTCG
GATTTCTGGG GGGTTTGGCC ATGATTATTA GCAACGGCCT AGCCATCCTT GACCGATTCT
TTTCTTTCAA CTTTGCGGGT GCCATGATCG CATTCTACGG TGTACTCTTC GGTGTTATTA
TTACTATGCT GGAAGCTCCT GGACCTTGCA GTCAGAGACT TCAGGGAGGA ATTCGTTTTT
ACGCCAAGTT CTTGGACTTT ACTTGGGGAC GTGGTGCTCT TTACTTTTTT GTAGGAACCC
TGCAGGTCTC CAATTGGAAC ATGCTGGACT GGGCTGTAGG GGGCTTTATG ATTTTTGTCG
GAGTAACCGC AATTGGAGTG GGAATTGCTG CAGCCCGAGA CCTCCGACTC CTTAAATTTG
CCATTCAAAA CGAGAATCAT CTTAAAGAAA AATGGAACCA GCACGATGCG GACGGAAACG
GTACACTAGA TGCCAAGGAA CTGACGGCCT TTGTAGCAGA TGCCGGTGTG GATATGTCGC
GAAACGAGAT TGCTGCCACA TTCCTGGCCC TCGACAAGAA CTTTGATGAG AAGATTGCCT
ACGAAGAATT CTTCTCTTGG TGGACAGCCG CCGGAACCTA CGGCGCCGGT ACAAGCATGT
CCGTATAGCT TTATGAGGCT TTGTCCATGT AGTAGTAAAT TTGCATTTCC GAC
 
Protein sequence
MTTSQEDEPL LNPQIAAAAA VSGAGFINSS TEKIKKARAE GPLTFRTLGF LGGLAMIISN 
GLAILDRFFS FNFAGAMIAF YGVLFGVIIT MLEAPGPCSQ RLQGGIRFYA KFLDFTWGRG
ALYFFVGTLQ VSNWNMLDWA VGGFMIFVGV TAIGVGIAAA RDLRLLKFAI QNENHLKEKW
NQHDADGNGT LDAKELTAFV ADAGVDMSRN EIAATFLALD KNFDEKIAYE EFFSWWTAAG
TYGAGTSMSV