Gene PHATR_37030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_37030 
Symbol 
ID7204475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp939578 
End bp940450 
Gene Length873 bp 
Protein Length290 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185981 
Protein GI219121517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAACG CATCGAACGG TGACGATGTG AATCATGGCA GCTACTGCGA TCGCTTGAAA 
GGCGAACTAA GCCCTTGCCA GGACTGGTTC CTGACGAAAG ACCAGTGGAG TGGCAAGGAC
CTTGACGTTG TCGCAAGTTT TTGTCCCAGC GGTATTTCCG TCTTGGCATG GAAGATTGTT
GCCACGGGGC TGACGTGGGG CACGTTGTTA TACAATTGGA TTAGTGATAC CCCATTGCCT
TCCTTCTTTT TGGCCTATCT GACAAATTGG TCTTTGCTTA TTGCTTGTGT CTATCACCTT
TGCAGCATTA CCAATACGCT TTTGGTAGCG CGTACCGAAC AACCGTTAGA TCACGCCACG
GGCCGAATCA AAGCCACCTG GGTTTTTTTC GTAATTGCAT CGCATGCCCA AATGATGGTT
ACCATATTCT ACTGGTATTC GGAGTGGTCT CCCGGAGATC CAGTGGAGTT CTCAAACATC
TCAAGCCACG GCGTGGTCAT GATTTTGACG TGGCTGGACG GCATCGTTGT AAATCGTATT
CCCATCCGAT TTATGCATTT TTGGGGGTTA GTAGTACCCT ATGATCTCAG CTACATAATG
TGGACCGTTC TTCACGCTTT GGCTAACATT GGAAATCCAA ACAAATCTGA CAATGATCCA
AATACAAATG ATGATGCCAT TTACGGCTCC ACATCTTGGA AAACGAACAC TGGGGCAGCC
TTGGTGACGG TATTTAGTGT CATCCTTGTG GCGAGTCCAC TCGTTTTTCT GTTACAGCGT
TCCTTGACTA TGTACTCTCG GCCATTTTGC TGTGGCGGAA ATCGTTTGAG ATATGTAGAA
AAAACACAAA CAAATGCTGA AGGTCTCAAC TGA
 
Protein sequence
MQNASNGDDV NHGSYCDRLK GELSPCQDWF LTKDQWSGKD LDVVASFCPS GISVLAWKIV 
ATGLTWGTLL YNWISDTPLP SFFLAYLTNW SLLIACVYHL CSITNTLLVA RTEQPLDHAT
GRIKATWVFF VIASHAQMMV TIFYWYSEWS PGDPVEFSNI SSHGVVMILT WLDGIVVNRI
PIRFMHFWGL VVPYDLSYIM WTVLHALANI GNPNKSDNDP NTNDDAIYGS TSWKTNTGAA
LVTVFSVILV ASPLVFLLQR SLTMYSRPFC CGGNRLRYVE KTQTNAEGLN