Gene PHATR_37027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_37027 
Symbol 
ID7204473 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp919755 
End bp920833 
Gene Length1079 bp 
Protein Length352 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185980 
Protein GI219121515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0567529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGGAA GAAGAGGTGC AACTGCCAAT GGGGAAGGTA GTCGCCGAGA AAAGTTGTAC 
GAGAGCATCA TGGGTATCGC GATATGCACT ACTAACGCTA CTGCCATTCC GGGAAACGCC
GATGAAACTG CCGCTGCCGA GGCGGCCGCC AAAGCGCTTT CCTCCCGACT CGTTACCTTT
GTCACTGGCT CACCAAAAAA GCCCGAGTGG ACGTCCACCC GGAATTGTGT ATTGTCAATG
GGGAAGCCAC GGACGGGACC CGAAACGCCC CTGTGCTGCT TTTTGAAAAG CATCCAACGG
TAAGGGCCCG ACACACAAGG GATCGCACCA TGGGATGTCA AGTACAAGCA GCCCGGGAAC
TCAAACCGGA AGAAGTACTC ATGACCATGC CACAATCCGC CATGATTTCA CCCAATCTGG
TGACCGCGAG TGATGCCGGA AAGGTGGTCT TGGCGTGCAT CTCACACGCA ACCGGCACGG
AAGGATTCTG GGACTTAGTG GAAAACACAA CCTTGTGCAA AGCAACCTTT TTGCCCAAAG
TGGTGGGGAA TACGGGGCCA CAGTTGTTGG TCAAGATTTG GCAGGAACGC AAAAAGGTGG
AAGCCCTATT TAACCATCGG AAAAATAGTC CCACTACGGC TACCATTGGG GCGTACTCAT
TAGCGGCATC CAAAGGTGTG TCCACACAAG CGCCGGTATT GGCATTGCTT ATTCATCTGC
AATTTTCCAA CACCAGTCAA CCCGGGGTCT CATCCGGCAT ACAAAAATTG CAAATGGCGC
TGGAGAGTAA CGACGGCAAC GCCTTGCGGT CAGCAACCAG TGTGCAAGTC CCTTCCGGGG
CCCCGGAGAC CTTTGCTCCG TGCGCATGGA CTCTACCATC CTCTGTGTCG ATTCCGCTGT
GCTGGAAACG TAATGAGCTT GCACTCTTGG CAGGATGCAT TCCGGGAGTA TCCTTGTTGA
AAGAGGTTGT CACCAGCACA TTACAGCTTG ACCCGGAGTT CACCGCCTTG CTGGAGGCCG
GCATTCTGGA ACACTTCCCG GAAACATTTC CACCGAGACT CTTGACCTGG GAGCATTGA
 
Protein sequence
MSGRRGATAN GEGSRREKLY ESIMGIAICT TNATAIPGNA DETAAAEAAA KALSSRLVTF 
VTGSPKKPEW TSTRNCVLSM GKPRTGPETP LCCFLKSIQR DRTMGCQVQA ARELKPEEVL
MTMPQSAMIS PNLVTASDAG KVVLACISHA TGTEGFWDLV ENTTLCKATF LPKVVGNTGP
QLLVKIWQER KKVEALFNHR KNSPTTATIG AYSLAASKGV STQAPVLALL IHLQFSNTSQ
PGVSSGIQKL QMALESNDGN ALRSATSVQV PSGAPETFAP CAWTLPSSVS IPLCWKRNEL
ALLAGCIPGV SLLKEVVTST LQLDPEFTAL LEAGILEHFP ETFPPRLLTW EH