Gene PHATR_36995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36995 
Symbol 
ID7204754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp836918 
End bp838195 
Gene Length1278 bp 
Protein Length425 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185964 
Protein GI219121482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0016758 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAA ATGAAAAGTC AGAACGAGCG AAAAAGCGCT GGAGACTCCT GCGACGCGCT 
CTGACGAAGC AAACGGTGGA AAAGACTACC GGCTTCCCAG GCTACTGTTT GATATCAGGA
ACGATAACGG CGTCGGACGA TGATAGCTTG CTGGGTGCCT TGTCATACAT CGACTATACA
ACAAATGTGG TGCAGCAGAT CGAGAGCTCG TTGCTGGCTA GCTTGGCCCT CAACACATCG
TTGCGGCAAA TTATCTTCTC CTTTGACCAC GAATCGCTAC CCCTGGGGCG TCCTCCTAAT
CTCATTGAAC TTTCTCAGTC CCTTCTTTCG AGCTGTGATC TCACGTCCTG CGAAGTCGAA
TCATTACCCA AAGAGGCCGA TCATACAGAA TCGTCAGCGC TCCGTATTTC CTTTGAGCCA
TCCACCGCAT CCTTGTGCTT TGCAATAAAA TCGTATACCT CGCCGACTGT TGCTGGCGTG
ACCCTAGCAC TTACCCGCGA ACGGGTCCGC CTTCAGATCA GCCTCGACGA ACTAACGACG
CATCATACGA CATCCATTGA CAATACGGGA AATATATGCG TATGGGATTG CGAAACTACG
CTGGCGTGGG CCGTCCTTGA ACAGCTCGAA AATATACTCG GGAATCTTGG TCGTTCGGTG
GTTGTTACGG AGCTGGGTTC TGGCATGGCC GGTCTGGCCG CCTTGAGCTT GTGCCGCTCG
CTTCCCCCAT GCTCCACCAT CTATGTGACT GATGGACATA TAAATAGTAT TCAGAACAAC
ATGGTGAATC TGCGATTGAT GACAGTGGCC GAACTTAGAC CCAGTACTGT CGACGTGTTT
TGCCAAAAGT TAAAATGGTC CCTGGAGGAG GACCAAGACA AGCTAGATCT TCCGGAAGAG
GCGGATCTGG TGTTGCTCTC TGATTGCGCG CATTTTGAAC ACTATCATGG GGAGCTTCTT
TGGACGCTTA TACGTGCAAC CAAAGTAGAC GGTCAAGTAT GGATGTGTCA TCCCGAGCGA
GGCAATTCAC TTTGGAGGTT TCTCCAACTC ATTGACTCAG TTAACGACAG CGCTTCCTAC
GGACCCCTTT TGCGCATAGT ATACTGGAAT CATGATCTTT TGGACGAAAG GCATCAAACT
TTTCTCGAAC GTCACTTAGA TACGTACGAT CCCAACGTAC ATCGTCCAAG GATATATCGA
TTGCAAAAGC TTCGTAAAAA CACGGAGATC GATCGAGCAG CAATTAAGCT ACACATTCAA
AAGCGTGATT GCAATTAG
 
Protein sequence
MNSNEKSERA KKRWRLLRRA LTKQTVEKTT GFPGYCLISG TITASDDDSL LGALSYIDYT 
TNVVQQIESS LLASLALNTS LRQIIFSFDH ESLPLGRPPN LIELSQSLLS SCDLTSCEVE
SLPKEADHTE SSALRISFEP STASLCFAIK SYTSPTVAGV TLALTRERVR LQISLDELTT
HHTTSIDNTG NICVWDCETT LAWAVLEQLE NILGNLGRSV VVTELGSGMA GLAALSLCRS
LPPCSTIYVT DGHINSIQNN MVNLRLMTVA ELRPSTVDVF CQKLKWSLEE DQDKLDLPEE
ADLVLLSDCA HFEHYHGELL WTLIRATKVD GQVWMCHPER GNSLWRFLQL IDSVNDSASY
GPLLRIVYWN HDLLDERHQT FLERHLDTYD PNVHRPRIYR LQKLRKNTEI DRAAIKLHIQ
KRDCN