Gene PHATR_36992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36992 
Symbol 
ID7204457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp830018 
End bp831163 
Gene Length1146 bp 
Protein Length381 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185793 
Protein GI219121125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.40266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC GATTCCGCCG TAAAGCATTT CTTTTCAGGG TATGCTTTCT AGTGTTGGCT 
GGGCAAGTCC TGCTACTCTG CCATAGATGG GCCGAGGAAG AACAGCAAGA ACACTACTCT
GTCGAGATAT TGCCGAGAAT TCATTTTACG CCAGCTGAAA GTAACTTATC ACTGAAATCT
TCATCCGCAT TGATCACAGA ACCCAGTTTT TCGTCCGGCA GCCAACGAAG GGATGAACTA
TCTGATACTT TATGGCCCGC AGACACTTTC CGCAATAGAA CTTTAGTGGT TGTTCTGGGT
AGTCTTCGCT GTGGGGAAGC GGCATGGAAG AGTCTATACC GCAATGTCCT GGATGTCAAC
AACGCTGATT TGGCCGTTAT TACGCAGGCT AAACCAAAAT CAGACAACAG CCGTCATACC
GTATCTTTGC TGCAACGGGC CAAATATGTT TGGGAGGTAC CTTCCTTTAC CGACTGGGCG
GATGCGTTGG ACTTAATGGC GGGAGGAAGA GCCTGGAGGG AACGGGTACC AGAATATTAT
ACAGACCACG AATCGGGTAT TCTGGGTGGT GCCTTGAATT ACTCTGGGAG CGGCGCAATT
ATCTTCTGGT ACCGATGGTT CCTTACGGAG CGGATTCGGG AACTGAATTG GAAGTCTCGG
TACGATCGGT TCGTTATTAC GCGAAGCGAT CATTTTTATC TCTGCCCACA CGACATCAAC
GAACTGGATC CTTACTTTAT GTGGGTTCCA CAAGGACAGA CCTGGGGTGG TGTCACCGAT
CGCTATTTGG TCGTTAATGC ATCGAATGTT TTGGAAGCAT TGAACATACT ACCCCCCTTA
TTGAAAAACC CTTCGAGATA CTCCAATTAT TTGCAACGGA AAGTCAATAC TGAGCATTTT
TTGGCCATGC GCTGGCGCGA ACAGTCGCTC TTTCCAGACA AGCGCAACAA GTTTCCCCGA
ACCATGTTCG TGTGTATGGC TCGCGAAGAT GCCCTCACAT CGTGGAAACC ACTGGGCATC
GAAGTGTTCC CGGGTGTGTT CACCAAGTAT CACATCGAAT TTTCGACGAG TCAACAGGCC
TGCCGAATGT CTCGACAAGA ACGACTAGAC TTCATAGCAC GCAAATCTAA TTTATTGCCG
ACTTAA
 
Protein sequence
MSKRFRRKAF LFRVCFLVLA GQVLLLCHRW AEEEQQEHYS VEILPRIHFT PAESNLSLKS 
SSALITEPSF SSGSQRRDEL SDTLWPADTF RNRTLVVVLG SLRCGEAAWK SLYRNVLDVN
NADLAVITQA KPKSDNSRHT VSLLQRAKYV WEVPSFTDWA DALDLMAGGR AWRERVPEYY
TDHESGILGG ALNYSGSGAI IFWYRWFLTE RIRELNWKSR YDRFVITRSD HFYLCPHDIN
ELDPYFMWVP QGQTWGGVTD RYLVVNASNV LEALNILPPL LKNPSRYSNY LQRKVNTEHF
LAMRWREQSL FPDKRNKFPR TMFVCMARED ALTSWKPLGI EVFPGVFTKY HIEFSTSQQA
CRMSRQERLD FIARKSNLLP T